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136

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, in press

75

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

74

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, in press, 2013. Link

73

Ryota Yamagami, Koki Yamashita, Hiroshi Nishimasu, Chie Tomikawa,Anna OCHI,Chikako Iwashita, Akira Hirata, Ryuichiro Ishitani, Osamu Nureki, Hiroyuki Hori: “The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO)”, the journal of biological chemistry, 2013, in press Pubmed

72

Ken’ichiro MATSUMOTO, Yoshikazu TANAKA, Tsuyoshi WATANABE, Ren MOTOHASI, Koji IKEDA, Kota TOBITANI, Min YAO, Isao TANAKA, Seiichi TAGUCHI: “Directed evolution and structural analysis of NADPH-dependent acetoacetyl-CoA reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics”, Appl. Environ. Microbiol., Vol.79. pp.6134-6139 2013.10.Pubmed

71

Anna OCHI, Ken’ichiro MATSUMOTO, Takashi OOBA, Kohei SAKAI , Takeharu TSUGE, and Seiichi TAGUCHI: “Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”, Appl. Microbiol. Biotechnol., Vol.97, pp. 3441-3447, 2013.04. Pubmed

70

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Link

69

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Link

68

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI and Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”,
Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

67

Yuyang SONG, Ken’ichiro MATSUMOTO, Tsutomu TANAKA, Akihiko Kondo, and Seiichi TAGUCHI: “Single-step production of polyhydroxybutyrate from starch by using α-amylase cell-surface displaying system of Corynebacterium glutamicum”, J. Biosci. Bioeng.,Vol.115(1),pp.12-14,2012.09 Pubmed

66

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA and Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp.70-72 2012.01. Pubmed

65

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., 2011, in press. Pubmed

64

Takako AWAI, Anna OCHI, IHSANAWATI, Toru SENGOKU, Akira HIRATA, Yoshitaka BESSHO, Shigeyuki YOKOHAMA, Hiroyuki HORI: “Substrate tRNA Recognition Mechanism of a Multisite-specific tRNA Methyltransferase, Aquifex aeolicus Trm1, Based on the X-ray Crystal Structure”, J. Biol. Chem., Vol. 286(40), pp. 35236-35246, 2011.10.

63

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., 2011, in press. Pubmed

62

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press. Link

61

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press.

60

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Enhanced cellular content and lactate fraction of the P(lactate-co-3-hydroxybutyrate) produced in recombinant Escherichia coli by the deletion of sigma factor RpoN”., J. Biosci. Bioeng., in press.

59

Miwa YAMADA, Ken’ichiro MATSUMOTO, Shu URAMOTO, Ren MOTOHASHI, Hideki ABE, Seiichi TAGUCHI: “Lactate fraction dependent machanical properties of semitransparent poly(lactate-co-3-hydroxybutyrate)s produced by control of lactyl-CoA monomer fluxes in recombinant Escherichia coli“, J. Biotechnol., Vol. 154, pp. 255-260, 2011.07. Pubmed

58

Kesaven BUHBALAN, Jo-Ann CHUAH, Fumi SHOZUI, Seiichi TAGUCHI, Christopher J. BRIGHAM, Anthony J. SINSKEY, and K. Kumar SUDESH: “Characterization of the highly active PHA synthase of Chromobacterium sp. USM2″, Appl. Environ. Microbiol. Vol. 77(9), pp. 2926-2933, 2011.05. Pubmed

57

Ken’ichiro MATSUMOTO, Kei KITAGAWA, Sung-Jin JO, Yuyang SONG, Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2011.04. Pubmed

56

Kazuo ISHIDA, Takashi KUNIBAYASHI, Chie TOMIKAWA, Anna OCHI, Tamotsu KANAI, Akira HIRATA, Chikako IWASHITA, Hiroyuki HORI: “Pseudouridine at position 55 in tRNA controls the contents of other modified nucleotides for low-temperature adaptation in the extreme-thermophilic eubacterium Thermus thermophilus”, Nucl. Acids Res., Vol. 39(6), pp. 2304-2318, 2011.3.

55

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Jian SUN, Seiichi TAGUCHI: “Biosynthesis of lactate(LA)-based polyester with a 96 mol% LA fraction and its application to stereocomplex formation”, Polymer Degradation and Stability, Vol. 96(4) pp. 499-504. 2011.02. Journal

54

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. Pubmed

53

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem.,Vol. 75(2), pp. 364-366, 2011.02. Pubmed

52

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. < Pubmed

51

Yoshitake ORIKASA, Yoshinobu NODASAKA, Takuji OHYAMA, Hidetoshi OKUYAMA, Nobutoshi ICHISE, Isao YUMOTO, Naoki MORITA, Min WEI, Takuji OHWADA: “Enhancement of the nitrogen fixation efficiency of genetically-engineered Rhizobium with high catalase activity”.
J Biosci Bioeng., Vol. 110(4), pp. 397-402, 2010.10 PubMed

50

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

49

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

48

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., Vol86(5), pp.1431-1438, 2010, 04. PubMed

47

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

46

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

45

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI. : ”Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″ , Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

44

Ken’ichiro MATSUMOTOKei KITAGAWA, Sung-Jin JO, Yuyang SONG, , Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2010.08. Pubmed

43

Qin WANG, Alexander MUEllER, Ring Leong CHEAN, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T. NOMURA: “Quick and efficient method for genetic transformation of biopolymer producing bacteria”, J. Chem. Technol. Biotechnol., Vol. 85(6), pp. 775-778, 2010.06. Journal

42

Shinji SUGIHARA, Yoshitake ORIKASA, Hidetoshi OKUYAMA:
“The Escherichia coli highly expressed entD gene complements the pfaE deficiency in a pfa gene clone responsible for the biosynthesis of long-chain n-3 polyunsaturated fatty acids”.
FEMS Microbiol Lett., Vol. 307(2), pp. 207-211, 2010.06 PubMed

41

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04 PubMed

40

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. : “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

39

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. :  “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

38

Anna Ochi, Koki MAKABE, Kunihiro KUWAJIMA, Hiroyuki HORI: “Flexible recognition of the tRNA G18 methylation target site by TrmH methyltransferase through first binding and induced fit processes” J. Biol. Chem., Vol. 285(12), pp. 9018-9029 2010.03.

37

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol. Vol. 85(4), pp.949-954 , 2010.01 PubMed

36

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol. Vol. 85(4), pp.949-954 , 2010.01 PubMed

35

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takahiro SASAKI, Seiichi TAGUCHI: “Engineering of polyhydroxyalkanoate synthase by Ser477X/Gln481X saturation mutagenesis for efficient production of 3-hydroxybutyrate-based copolyesters”, Appl. Microbial. Biotechnol., Vol. 84(6), pp.1117-1124, 2009.10. PubMed

34

Sung-Jin Jo, Chean Ring Leong, Ken’ichiro Matsumoto, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration.”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

33

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

32

Takako AWAI, Satoshi KIMURA, Chie TOMIKAWA, Anna OCHI, IHSANAWATI,Yoshitaka BESSHO, Shigeyuki YOKOYAMA, Satoshi OHNO, Kazuya NISHIKAWA, Takashi YOKOBAWA, Tsutomu SUZUKI, Hiroyuki HORI: “Aquifex aeolicus tRNA (N2,N2-guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA”, J. Biol. Chem., 384(31), pp. 20467-20478. 2009.7.

31

Yoshitake Orikasa, Mika Tanaka, Shinji Sugihara, Ryuji Hori, Takanori Nishida, Akio Ueno, Naoki Morita, Yutaka Yano, Kouhei Yamamoto, Akira Shibahara, Hidenori Hayashi, Yohko Yamada, Akiko Yamada, Reiko Yu, Kazuo Watanabe, Hidetoshi Okuyama: “pfaB products determine the molecular species produced in bacterial polyunsaturated fatty acid biosynthesis”. FEMS Microbiol Lett., Vol. 295(2), pp. 170-176, 2009

30

Sung-Jin Jo, Chean Ring Leong, Ken’ichiro Matsumoto, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration.”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

29

Miwa YAMADA, Ken’ichiro MATSUMOTO, Takanori NAKAI, Seiichi TAGUCHI: “Microbial production of lactate-enriched poly[(R)-lactate-co-(R)-3-hydroxybutyrate] with novel thermal properties”, Biomacromolecules, Vol.10(4), pp.677-681, 2009.04.PubMed

28

Ken’ichiro Matsumoto, Fumi SHOZUI, Yasuharu SATOH, Kenji TAJIMA, Masanobu MUNEKATA, and Seiichi TAGUCHI: “Kinetic analysis of engineered polyhydroxyalkanoates synthases with broad substrate specificity”, Polymer Journal., Vol. 41(3), pp.237-240, 2009.03Journal.

27

Seiichi TAGUCHI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Kenji TAJIMA, Yasuharu SATO, Masanobu MUNEKATA, Katsuhiro OHONO, Katsunori KOHDA, Takashi SHIMAMURA, Hiromi KAMBE, and Shusei OBATA: “A microbial factory for lactate-based polyesters using a lactate-polymerizing enzyme”, Proc. Natl. Acad. Sci. USA, Vol. 105 (45), pp. 17323-17327. 2008.11 PubMed

26

Shinji Sugihara, Yoshitake Orikasa, Hidetoshi Okuyama: “An EntD-like phosphopantetheinyl transferase gene from Photobacterium profundum SS9 complements pfa genes of Moritella marina strain MP-1 involved in biosynthesis of docosahexaenoic acid”. Biotechnol Lett. 30(3):411-414. 2008.

25

Hidetoshi Okuyama, Yoshitake Orikasa, Takanori Nisida : “Significance of antioxidative functions of eicosapentaenoic and docosahexaenoic acids in marine microorganisms”. Appl Environ Microbiol. 74(3):570-574. 2008.

24

Tsuyoshi WATANABE, Yuji ODA: “Comparison of Sucrose-Hydrolyzing Enzymes Produced by Rhizopus oryzae and Amylomyces rouxii“, Biosci. Biotechnol. Biochem., Vol. 72 pp.3167-3173, 2008.12.

23

Chie TOMIKAWA, Anna OCHI, Hiroyuki HORI: “The C-terminal region of thermophilic tRNA (m7G46) methyltransferase (TrmB) stabilizes the dimer structure and enhances fidelity of methylation”, Proteins, 71(3), pp. 1400-1408, 2008.5.

22

Keisuke MATSUMOTO, Chie TOMIKAWA, Takashi TOYOOKA, Anna OCHI, Yoshitaka TAKANO, Naoyuki TAKAYANAGI, Masato ABE, Yaeta ENDO, Hiroyuki HORI: “Production of yeast tRNA (m(7)G46) methyltransferase (Trm8-Trm82 complex) in a wheat germ cell-free translation system”, J. Biotechnol., Vol. 133(4), pp. 453-460, 2008.2.

21

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

20

Takanori Nishida, Naoki Morita, Yutaka Yano, Yoshitake Orikasa and Hidetoshi Okuyama : “The antioxidative function of eicosapentaenoic acid in a marine bacterium, Shewanella marinintestina IK-1″. FEBS Lett. 581(22): 4212-4216. 2007.

19

Yoshitake Orikasa, Yukiya Ito, Takanori Nishida, Kazuo Watanabe, Naoki Morita, Takuji Ohwada, Isao Yumoto, and Hidetoshi Okuyama: “Enhanced heterologous production of eicosapentaenoic acid in Escherichia coli cells that coexpress eicosapentaenoic acid biosynthesis pfa genes and foreign DNA fragments including a high-performance catalase gene, vktA“. Biotechnol. Lett., 29(5): 803-809. 2007.

18

Hidetoshi Okuyama, Yoshitake Orikasa and Takanori Nishida: “In vivo conversion of triacylglycerol to docosahexaenoic acid-containing phospholipids in a thraustochytrid-like microorganism, strain 12B”. Biotechnol Lett. Dec;29(12):1977-81, 2007.

17

Hidetoshi Okuyama, Yoshitake Orikasa, Takanori Nishida, Kazuo Watanabe, and Naoki Morita : “Bacterial genes responsible for the biosynthesis of eicosapentaenoic and docosahexaenoic acids and their heterologous expression”. Appl Environ Microbiol., 73(3): 665-670 (Review). 2007.

16

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

15

Anna OCHI, Hiroyuki HORI: ”Hydroxyl radical probing of tRNA (Gm18) methyltransferase [TrmH]-AdoMet-artificial tRNA ternary complex”, Nucleic Acids Symp. Ser., Vol. 51(1), pp.373-374, 2007.

14

Yuki MUNEYOSHI, Keisuke MATSUMOTO, Chie TOMIKAWA, Takashi TOYOOKA, Anna OCHI, Takashi MASAOKA, Yaeta ENDO, Hiroyuki HORI: ” Hetero subunit interaction and RNA recognition of yeast tRNA (m7G46) methyltransferase synthesized in a wheat germ cell-free translation system”, Nucleic Acids Symp. Ser., Vol. 51(1), pp. 359-360, 2007.

13

Miwa YAMADA, Akiko WAKUDA, Seiichi TAGUCHI : “Morphological Change in Cellular Granule Formation of Poly[(R)-3-hydroxybutyrate] Caused by DNA-Binding-Related Mutations of an Autoregulated Repressor PhaR”, Biosci. Biotechnol. Biochem., Vol. 71(6), 1572-1576, 2007.06 PubMed

12

Miwa YAMADA, Koichi YAMASHITA, Akiko WAKUDA, Kazuyoshi ICHIMURA, Akira MAEHARA, Michihisa MAEDA, and Seiichi TAGUCHI: “Autoregulator protein PhaR for biosynthesis of polyhydroxybutyrate [P(3HB)]  possibly has two separate domains that bind to the target DNA and P(3HB): functional mapping of amino acid residues responsible for DNA binding.”, J. Bacteriol., Vol. 189(3), pp. 1118-1127, 2007.02PubMed

11

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI. :”Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″ , Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

10

Takanori Nishida, Yoshitake Orikasa, Kazuo Watanabe, and Hidetoshi Okuyama: “The cell membrane-shielding function of eicosapentaenoic acid for Escherichia coli against exogenously added hydrogen peroxide”. FEBS Lett., 580: 6690-6694. 2006.

9

Yoshitake Orikasa, Takanori Nishida, Akiko Yamada, Reiko Yu, Kazuo Watanabe, Akira Hase, Naoki Morita, and Hidetoshi Okuyama: “Recombinant production of docosahexaenoic acid in a mode of polyketide biosynthesis in Escherichia coli“. Biotechnol. Lett., 28: 1841-1847. 2006.

8

Yoshitake Orikasa, Takanori Nishida , Akira Hase, Kazuo Watanabe, Naoki Morita, and Hidetoshi Okuyama: “A phosphopantetheinyl transferase gene responsible for biosynthesis of n-3 polyunsaturated fatty acids from Moritella marina strain MP-1″. FEBS Lett., 580: 4423-4429. 2006.

7

Takanori Nishida, Yoshitake Orikasa, Yukiya Ito, Reiko Yu, Akiko Yamada, Kazuo Watanabe, and Hidetoshi Okuyama: “Escherichia coli engineered to produce eicosapentaenoic acid becomes resistant against oxidative damages”. FEBS Lett., 580: 2731-2735. 2006.

6

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

5

Keisuke MATSHUMOTO, Takashi TOYOOKA, Chie TOMIKAWA, Anna OCHI, Yoshitaka TAKANO, Naoyuki TAKAYANAGI, Yaeta ENDO, Hiroyuki HORI: “RNA recognition mechanism of eukaryote tRNA (m7G46) methyltransferase (Trm8?Trm82 complex)”, FEBS Lett., Vol. 581(8), pp. 1599-1604, 2007.4

4

Sung-Jin JO, Michihisa MAEDA, Toshihiko OOI,  Seiichi TAGUCHI: “Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum.” J. Biosci. Bioeng., Vol. 102, pp. 233-236, 2006.09PubMed

3

Koichi YAMASHITA, Miwa YAMADA, Keiji NUMATA, Seiichi TAGUCHI: “Nonspecific hydrophobic interactions of a repressor protein, PhaR, with poly[(R)-3-hydroxybutyrate] film studied with a quartz crystal microbalance”, Biomacromolecules, Vol. 7(8), pp. 2449-2454, 2006.08PubMed

2

K. Hirota, Y. Nodasaka, Y. Orikasa, H. Okuyama, and I. Yumoto : “Shewanella pneumatophoruse sp. nov., eicosapentanoic-acid-producing marine bacterium isolated from pacific mackerel (Pneumatophorus japonicus) intestine”. Int. J. Syst. Evol. Microbiol., 55: 2355-2359. 2005.

1

Yoshitake Orikasa, Akiko Yamada, Reiko Yu, Yukiya Ito, Takanori Nishida, Isao Yumoto, Kazuo Watanabe, and Hidetoshi Okuyama: “Characterization of the eicosapentaenoic acid biosynthesis gene cluster from Shewanella sp. strain SCRC-2738″. Cell. Mol. Biol., Vol.50, 625-630, 2004.

Associate Prof. Toshihiko OOI

136

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, in press

35

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press. Link

34

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

33

Jian YU, Daiki OGATA, ZuoQi GAI, Seiichi TAGUCHI, Isao TANAKA, Toshihiko OOI, Min YAO: “Structure of AzrA, AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism”, Acta Crystallographica Section D., Vol. 70, pp.553-564, 2014.02. Pubmed

32

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”,
Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

31

Ken’ichiro MATSUMOTO, Takehiro OKEI, Inori HONMA, Toshihiko OOI, Hirobumi AOKI, Seiichi TAGUCHI: “Efficient (R)-3-hydroxybutyrate production using acetyl-CoA regenerating pathway catalyzed by coenzyme A transferase”, Appl. Microbiol. Biotechnol., Appl. Microbiol. Biotechnol.,Vol.97(1),pp.205-210,2013.01. Pubmed

30

Toshihiko OOI , Daiki OGATA, Ken’ichiro MATSUMOTO, Gen NAKAMURA, Jian YU, Yao MIN, Masaya KITAMURA, Seiichi TAGUCHI, “Flavin-binding of azoreductase: Direct evidences for dual-binding property of apo-azoreductase with FMN and FAD”, J. Mol. Cat. B, Vol. 74(3-4), pp.204-208 2012.2. Link

29

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA and Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp.70-72 2012.01. Pubmed

28

Daiki OGATA, Toshihiko OOI, Takaaki FUJIWARA, Seiichi TAGUCHI, Isao TANAKA, Min YAO. : “Crystallization and preliminary X-ray studies of azoreductases from Bacillus sp.B29″ , Acta Crystallographica section F, Vol. 66(5), pp. 503-505, 2010.05. Pubmed

27

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04. PubMed

26

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., (2010). PubMed

25

Toshihiko OOI, Hirokazu SATO, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “A unique post-translational processing of an exo-β-1,3-glucanase of Penicillium sp. KH10 expressed in Aspergillus oryzae“. Protein Expression and Purification. 2009., Vol. 67(2), pp.126-131, 2009.08.PubMed

25

Hori C, Yamazaki T, Ribordy G, Takisawa K, Matsumoto K, Ooi T, Zinn M, Taguchi S. High-cell density culture of poly(lactate-co-3-hydroxybutyrate)-producing Escherichia coli by using glucose/xylose-switching fed-batch jar fermentation.  J Biosci Bioeng., in press

 

24

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

23

Toshihiko OOI, Takeshi SHIBATA, Ken’ichiro MATSUMOTO, Sinichi KINOSHITA, Seiichi TAGUCHI: “Comparative enzymatic analysis of azoreductases from Bacillus sp. B29″, Biosci. Biotechnol. Biochem., Vol. 73(5), pp.1209-1211, 2009.05.PubMed

22

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

21

Toshihiko OOI, Takeshi SHIBATA, Reiko SATO, Hiroaki OHNO, Sinichi KINOSHITA, Tran Linh Thnoc, Seiichi TAGUCHI: “An azoreductase, aerobic NADH-dependent flavoprotein discovered from Bacillus sp.: functional expression and enzymatic characterization”, Appl. Microbiol. Biotechnol., Vol. 75(2) , pp. 377-386, 2007.05PubMed

21

Matsumoto K,Iijima M, Hori C, Utsunomia C, Ooi T, and Taguchi S.: “In Vitro Analysis of D‐Lactyl-CoA-Polymerizing Polyhydroxyalkanoate Synthase in Polylactate and Poly(lactate-co-3 hydroxybutyrate) Syntheses”, Biomacromolecules 19(7):2889-2895.

20

Sung-Jin JO, Michihisa MAEDA, Toshihiko OOI, Seiichi TAGUCHI: ” Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum” J. Biosci. Bioeng., Vol. 102 , pp. 233-236, 2006.09PubMed

20

Hori C, Oishi K, Matsumoto K, Taguchi S, Ooi T.: Site-directed saturation mutagenesis of polyhydroxylalkanoate synthase for efficient microbial production of poly[(R)-2-hydroxybutyrate], J Biosci Bioeng., 125(6):632-636

19

Kazuki OKUNO, Masayuki YABUTA, Kazuhiro OHSUYE, Toshihiko OOI, and Shinichi KINOSHITA:
“An Analysis of target perferences of Escherichia coli Outermembrane endoprotease OmpT for use in therapeutic peptide production: efficient cleavage of substrates with basic amino acids at the P4 and P6 positions”, Biotechnol. Appl. Biochem. Vol.36, pp. 77-84, 2002PubMed

19

Matsumoto K, Hori C, Fujii R, Takaya M, Ooba T, Ooi T, IsonoT, Satoh T, Taguchi S.: “Dynamic changes of intracellular monomer levels regulate block sequence of polyhydroxyalkanoates in engineered Escherichia coli.”, Biomacromolecules, Vol.19(2), pp.662-671, 2018.

18

Kazuki OKUNO, Masayuki YABUTA, Kouji KAWANISHI, Kazuhiro OHSUYE, Toshihiko OOI, and Shinichi KINOSHITA: “Substrate Specifity at the P1′ Site of Escherichia coli OmpT under Denaturing Conditions”,
Biosci. Biotechnol. Biochem., Vol.66 (11), pp. 127-134, 2002PubMed

17

Daisuke HISHINUMA, Akemi MAKABE, Hideo TSURUGA, Toshihiko OOI, and Shinichi KINOSHITA:
“Fungal Decolorization of Microbially Treated Night Soils”,
Japanese Journal of Water Treatment Biology, Vol.37 (3), pp. 123-128, 2001.Journal

16

Yasumitsu MIYAMOTO, Toshihiko OOI, and Shinichi KINOSHITA:
“Production of lactobionic acid from whey by Pseudomonas sp. LS13-1”,

Biotechnology Letters, Vol.22, pp. 427-430, 2000
15

Jintana KRAIWATTANAPONG, Toshihiko OOI, Shinichi KINOSHITA, SUGIMURA,Tomoo SAWABE and Yoshio EZURA:“Hydrophobic cluster analysis and classification of sixteen bacterial alginate lyases”, World Journal of Microbiology & Biotechnology, Vol.16, pp. 219-224, 2000

14

Akira OHNISHI, Toshihiko OOI, Shinichi KINOSHITA, Hirotaka TOMATSURI, Kazuyuki UMEDA, Shunsaku UEDA, Yasuo HATA and Motoo ARAI :“Analysis of a catalytic acidic pair in the active center of cellulase from Aspergillus aculeatus”, Bioscience, Biotechnology and Biochemistry, Vol. 63, pp. 2157-2162, 1999

13

Toshihiko OOI, Keiko MOROTOMI, Shinichi KINOSHITA, Junko HONDA, Shunsaku UEDA and Motoo ARAI:“Analysis of 5′-upstream non-coding region of FI-carboxymethyl cellulose gene from Aspergillus aculeatus”, World Journal of Microbiology & Biotechnology Letters Vol. 21, pp. 735-739, 1999

12

Chartchai KHANONGNUCH, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and nucleotide sequence of β-mannanase and cellulase genes from Bacillus sp. 5H”, World Journal of Microbiology & Biotechnology Letters Vol. 15, pp. 221-228, 1999

11

Jintana KRAIWATTANAPONG, Keiko MOTOMURA, Toshihiko OOI, Shinichi KINOSHITA:
“Characterization of alginate lyase (ALYII) from Pseudomonas sp. OS-ALG-9 expressed in recombinant Escherichia coli”, World Journal of microbiology & Biotechnology, Vol. 15, pp. 105-109, 1999

10

Jintana KRAIWATTANAPONG, Hideo TSURUGA, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and sequencing of a Deleya marina gene encoding for alginate lyase”, World Journal of Microbiology & Biotechnology Letters, Vol. 21, pp. 169-174, 1999

9

Chartchai KHANONGNUCH, Saisamorn LUMYONG, Toshihiko OOI, Shinichi KINOSHITA:
“A non-cellulase producing strain of Bacillus subtilis and its potential use in pulp biobleaching”, World Journal of Microbiology & Biotechnology Letters, Vol. 21, pp. 61-63, 1999

8

Chartchai KHANONGNUCH, Kouhei ASADA, Hideo TSURUGA, Toshihiko OOI, Shinichi KINOSHITA, Saisamorn Lumyong:“ β-Mannanase and xylanase of Bacillus subtilis 5H active for bleaching of crude pulp ”, Journal of Fermentation and Bioengineering, Vol. 86, pp. 461-466, 1998

7

Kunichika NAKAMIYA, Gyousei SAKASHITA, Toshihiko OOI, Shinichi KINOSHITA:
“Enzymatic degradation of polystyrene by hydroquinone peroxydase of Azotobacter beijerinckii HM121 ”, Journal of Fermentation and Bioengineering, Vol. 84, pp. 480-482, 1997

6

Jintana KRAIWATTANPONG, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and sequence analysis of the gene (alyII) coding for alginate lyase of Pseudomonas sp. OS-ALG-9”, World Journal of Microbiology & Bioscience, Biotechnology and Biochemistry, Vol. 61, pp.1853-1857 1997

5

Kunichika NAKAMIYA, Toshihiko OOI, Shinichi KINOSHITA :
“Degradation of synthetic water-soluble polymers by hydroquinone peroxydase”, Journal of Fermentation and Bioengineering, 1997

4

Kunichika NAKAMIYA, Toshihiko OOI, Shinichi KINOSHITA:
“Non-heme hydroquinone peroxidase from Azotobacter beijerinckii HM121”, World Journal of Microbiology & Journal of Fermentation and Bioengineering, Vol. 84, pp. 14-21, 1997

3

Shinichi MATSUDA, Yuusuke KAWAKAMI, Hiroyuki TAKEDA, Toshihiko OOI, Shinichi KINOSHITA:
“Purification and properties of mutanase from Bacillus circulans”, World Journal of Microbiology & Journal of Fermentation and Bioengineering, Vol. 83, pp. 593-595, 1997

2

Takashi KAWAGUCHI, Tatsuji ENOKI, Shinji TSURUMAKI, Jun-ichi SUMITANI, Mistuhiru UEDA, Toshihiko OOI, Motoo ARAI :“Cloning and sequencing of the cDNA encoding -glucosidase 1 from Aspergillus aculeatus.”, World Journal of Microbiology & Gene, Vol. 173, pp. 287-288, 1996

01

ああああ

1

Yoshiaki HATAKEYAMA, Hiroyuki TAKEDA, Toshihiko OOI, Shinichi KINOSHITA:
“Kinetic parameters of -fructofuranosidase from Scopulariopsis brevicaulis ”, Journal of Fermentation and Bioengineering, Vol. 81, pp. 518-523, 1996

Associate Prof. Ken’ichiro MATSUMOTO

136

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, in press

53

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Enhanced cellular content and lactate fraction of the P(lactate-co-3-hydroxybutyrate) produced in recombinant Escherichia coli by the deletion of sigma factor RpoN”., J. Biosci. Bioeng., in press.

52

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press. Link

51

Lucia SALAMANCA-CARDONA, Ryan A SCHEEL, Benjamin R LUNDGREN, Arthur J STIPANOVIC, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T NOMURA:”Deletion of the pflA gene in Escherichia coli LS5218 and its effects on the production of polyhydroxyalkanoates using beechwood xylan as a feedstock.”, Bioengineered., Vol. 5, Issue. 5, 2014.06.Link

50

Ryan TAPPEL, Wenyang PAN, N. BERGEY, Qin WANG, Ivory PATTERSON, Obiajulu OZUMBA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher NOMURA:”Engineering Escherichia coli for improved production of short-chain-length-co-medium-chain-length poly[(R)-3-hydroxyalkanoate] (SCL-co-MCL PHA) copolymers from renewable non-fatty acid feedstocks”, ACS Sustainable Chemistry & Engineering., 2014.05.Link

49

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

48

Ken’ichiro MATSUMOTO, Yoshikazu TANAKA, Tsuyoshi WATANABE, Ren MOTOHASI, Koji IKEDA, Kota TOBITANI, Min YAO, Isao TANAKA, Seiichi TAGUCHI: “Directed evolution and structural analysis of NADPH-dependent acetoacetyl-CoA reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics”, Appl. Environ. Microbiol., Vol.79. pp.6134-6139 2013.10.Pubmed

47

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Link

46

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”, Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

45

Yuyang SONG, Ken’ichiro MATSUMOTO, Tsutomu TANAKA, Akihiko Kondo, Seiichi TAGUCHI: “Single-step production of polyhydroxybutyrate from starch by using α-amylase cell-surface displaying system of Corynebacterium glutamicum”, J. Biosci. Bioeng.,Vol.115(1),pp.12-14, 2012.09 Pubmed

44

Anna OCHI, Ken’ichiro MATSUMOTO, Takashi OOBA, Kohei SAKAI , Takeharu TSUGE, Seiichi TAGUCHI: “Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”, Appl. Microbiol. Biotechnol., Vol.97, pp. 3441-3447, 2013.04. Pubmed

43

Ken’ichiro MATSUMOTO, Takehiro OKEI, Inori HONMA, Toshihiko OOI, Hirobumi AOKI, Seiichi TAGUCHI: “Efficient (R)-3-hydroxybutyrate production using acetyl-CoA regenerating pathway catalyzed by coenzyme A transferase”, Appl. Microbiol. Biotechnol., Appl. Microbiol. Biotechnol.,Vol.97(1),pp.205-210, 2012.05. Pubmed

42

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., 2011, in press. Pubmed

41

Toshihiko OOI, Daiki OGATA, Ken’ichiro MATSUMOTO, Gen NAKAMURA, Jian YU, Yao MIN, Masaya KITAMURA, Seiichi TAGUCHI, “Flavin-binding of azoreductase: Direct evidences for dual-binding property of apo-azoreductase with FMN and FAD”, J. Mol. Cat. B, Vol. 74(3-4), pp.204-208 2012.2. Link

40

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA and Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp.70-72 2012.01. Pubmed

39

Ken’ichiro MATSUMOTO, Ayako ISHIYAMA, Kohei SAKAI, Tetsufumi SHIBA, Seiichi TAGUCHI: “Biosynthesis of glycolate-based polyesters containing medium-chain-length 3-hydroxyalkanoates in recombinant Escherichia coli expressing engineered polyhydroxyalkanoate synthase”, J. Biotechnol.,Vol.156(3), pp.214-217 2011.12. Pubmed

38

Xuerong HAN, Yasuharu SATOH, Toshifumi SATOH, Ken’ichiro MATSUMOTO, Toyoji KAKUCHI, Seiichi TAGUCHI, Tohru DAIRI, Masanobu MUNEKATA, Kenji TAJIMA: “Chemo-enzymatic synthesis of polyhydroxyalkanoate (PHA) incorporating 2-hydroxybutyrate by wild-type class I PHA synthase from Ralstonia eutropha“, Appl. Microbiol. Biotechnol., Vol. 92(3), pp. 509-217, 2011.10. Pubmed

37

Miwa YAMADA, Ken’ichiro MATSUMOTO, Shu URAMOTO, Ren MOTOHASHI, Hideki ABE, Seiichi TAGUCHI: “Lactate fraction dependent machanical properties of semitransparent poly(lactate-co-3-hydroxybutyrate)s produced by control of lactyl-CoA monomer fluxes in recombinant Escherichia coli“, J. Biotechnol., Vol. 154, pp. 255-260, 2011.07. Pubmed

36

Ken’ichiro MATSUMOTO, Kenjiro MORIMOTO, Aoi GOHDA, Hiroaki SHIMADA, Seiichi TAGUCHI: “Improved polyhydroxybutyrate (PHB) production in transgenic tobacco by enhancing translation efficiency of bacterial PHB biosynthetic genes”, J. Biosci. Bioeng., Vol. 111(4), pp. 485-488, 2011.04. Pubmed

35

Ken’ichiro MATSUMOTO, Kei KITAGAWA, Sung-Jin JO, Yuyang SONG, Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2011.04. Pubmed

34

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. Pubmed

33

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Jian SUN, Seiichi TAGUCHI: “Biosynthesis of lactate(LA)-based polyester with a 96 mol% LA fraction and its application to stereocomplex formation”, Polymer Degradation and Stability, Vol. 96(4) pp. 499-504. 2011.02. Journal

32

Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Koji IKEDA, Tasuku KOMANOYA, Atsushi FUKUOKA, Seiichi TAGUCHI: “Chemo-microbial conversion of cellulose into polyhydroxybutyrate through ruthenium-catalyzed hydrolysis of cellulose into glucose”, Bioresource Technol., Vol. 102(3), pp. 3564-3567, 2011.02. Pubmed

31

Kao-Chih She, Hiroaki Kusano, Kazuyoshi Koizumi, Hiromoto Yamakawa, Makoto Hakata, Tomohiro Imamura, Masato Fukuda, Natsuka Naito, Yumi Tsurumaki, Mitsuhiro Yaeshima, Tomohiko Tsuge, Ken’ichiro Matsumoto, Mari Kudoh, Eiko Itoh, Shoshi Kikuchi, Naoki Kishimoto, Junshi Yazaki, Tsuyu Ando, Masahiro Yano, Takashi Aoyama, Tadamasa Sasaki, Hikaru Satoh, Hiroaki Shimada: “A Novel Factor FLOURY ENDOSPERM 2 is Involved in Regulation of Rice Grain Size and Starch Quality”, Plant Cell, 22(10), pp. 3280-3294, 2010.10 Pubmed

30

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

29

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

28

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI :”Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″ , Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

27

Qin WANG, Alexander MUEllER, Ring Leong CHEAN, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T. NOMURA: “Quick and efficient method for genetic transformation of biopolymer producing bacteria”, J. Chem. Technol. Biotechnol., Vol. 85(6), pp. 775-778, 2010.06. Journal

26

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04. PubMed

25

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., Vol. 86(5), pp. 1431-1438, 2010.04. PubMed

25

Hori C, Yamazaki T, Ribordy G, Takisawa K, Matsumoto K, Ooi T, Zinn M, Taguchi S. High-cell density culture of poly(lactate-co-3-hydroxybutyrate)-producing Escherichia coli by using glucose/xylose-switching fed-batch jar fermentation.  J Biosci Bioeng., in press

 

24

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. : “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

23

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol. Vol. 85(4), pp.949-954 , 2010.01 PubMed

22

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takahiro SASAKI, Seiichi TAGUCHI: “Engineering of polyhydroxyalkanoate synthase by Ser477X/Gln481X saturation mutagenesis for efficient production of 3-hydroxybutyrate-based copolyesters”, Appl. Microbial. Biotechnol., Vol. 84(6), pp.1117-1124, 2009.10. PubMed

21

Toshihiko OOI, Hirokazu SATO, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “A unique post-translational processing of an exo-β-1,3-glucanase of Penicillium sp. KH10 expressed in Aspergillus oryzae“. Protein Expression and Purification. 2009., Vol. 67(2), pp.126-131, 2009.08.PubMed

21

Matsumoto K,Iijima M, Hori C, Utsunomia C, Ooi T, and Taguchi S.: “In Vitro Analysis of D‐Lactyl-CoA-Polymerizing Polyhydroxyalkanoate Synthase in Polylactate and Poly(lactate-co-3 hydroxybutyrate) Syntheses”, Biomacromolecules 19(7):2889-2895.

20

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

20

Hori C, Oishi K, Matsumoto K, Taguchi S, Ooi T.: Site-directed saturation mutagenesis of polyhydroxylalkanoate synthase for efficient microbial production of poly[(R)-2-hydroxybutyrate], J Biosci Bioeng., 125(6):632-636

19

Toshihiko OOI, Takeshi SHIBATA, Ken’ichiro MATSUMOTO, Sinichi KINOSHITA and Seiichi TAGUCHI: “Comparative enzymatic analysis of azoreductases from Bacillus sp. B29″, Biosci. Biotechnol. Biochem., Vol. 73(5), pp.1209-1211, 2009.05.PubMed

19

Matsumoto K, Hori C, Fujii R, Takaya M, Ooba T, Ooi T, IsonoT, Satoh T, Taguchi S.: “Dynamic changes of intracellular monomer levels regulate block sequence of polyhydroxyalkanoates in engineered Escherichia coli.”, Biomacromolecules, Vol.19(2), pp.662-671, 2018.

18

Ken’ichiro MATSUMOTO, Kazuma TAKASE, Yoko YAMAMOTO, Yoshiharu DOI, Seiichi TAGUCHI: “Chimeric enzyme composed of polyhydroxyalkanoate (PHA) synthases from Ralstonia eutropha and Aeromonas caviae enhances production of PHAs in recombinant Escherichia coli“, Biomacromolecules, Vol.10(4), pp.682-685, 2009.04.PubMed

17

Miwa YAMADA, Ken’ichiro MATSUMOTO, Takanori NAKAI, Seiichi TAGUCHI: “Microbial production of lactate-enriched poly[(R)-lactate-co-(R)-3-hydroxybutyrate] with novel thermal properties”, Biomacromolecules, Vol.10(4), pp.677-681, 2009.04.PubMed

17

Utsunomia, C., Saito, T.,  Matsumoto, K., Hori, C., Isono, T., Satoh, T., Taguchi, S. Synthesis of lactate (LA)-based poly(ester-urethane) using hydroxyl-terminated LA-based oligomers from a microbial secretion system. J. Polym. Res. Vol. 24, pp.167-172, 2017.

16

Ken’ichiro MATSUMOTO, Takaaki MURATA, Rina NAGAO, Christopher NOMURA, Satoshi ARAI, Kazuma TAKASE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA: “Production of short-chain-length/medium-chain-length polyhydroxyalkanoate (PHA) copolymer in the plastid of Arabidopsis thaliana using the evolved 3-ketoacyl-acyl carrier protein synthase III”, Biomacromolecules, Vol.10(4), pp.686-690, 2009.PubMed

16

Utsunomia, C., Hori, C., Matsumoto, K., Taguchi, S.: “Investigation of the Escherichia coli membrane transporters involved in the secretion of D-lactate-based oligomers by loss-of-function screening” J Biosci Bioeng., Vol.124 (6),  pp.635-640, 2017.

15

Sung-Jin JO, Chean Ring LEONG, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

14

Ken’ichiro MATSUMOTO, Fumi SHOZUI, Yasuharu SATOH, Kenji TAJIMA, Masanobu MUNEKATA, Seiichi TAGUCHI: “Kinetic analysis of engineered polyhydroxyalkanoates synthases with broad substrate specificity”, Polymer Journal., Vol. 41(3), pp.237-240, 2009.03Journal.

13

Seiichi TAGUCHI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Kenji TAJIMA, Yasuharu SATO, Masanobu MUNEKATA, Katsuhiro OHONO, Katsunori KOHDA, Takashi SHIMAMURA, Hiromi KAMBE, Shusei OBATA: “A microbial factory for lactate-based polyesters using a lactate-polymerizing enzyme”, Proc. Natl. Acad. Sci. USA, Vol. 105 (45), pp. 17323-17327. 2008.11 PubMed

12

Christopher T. NOMURA, Tomoyo TANAKA, T.E. EGUEN, A.S. APPAH, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI S, Ortiz CL, Yoshiharu DOI:  “FabG mediates polyhydroxyalkanoate production from both related and nonrelated carbon sources in recombinant Escherichia coli LS5218″, Biotechnol. Prog., Vol.24(2), pp.342-351, 2008.04PubMed

11

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol.104(6), pp. 457-463, 2007.12PubMed

10

Ken’ichiro MATSUMOTO, Yuko ARAI, Rina NAGAO, Takeshi MURATA, Kazuma TAKASE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA, Yoshiharu DOI:
“Synthesis of short-chain-length/medium-chain length polyhydroxyalkanoate (PHA) copolymers in peroxisome of the transgenic Arabidopsis thaliana harboring the PHA synthase gene from Pseudomonas sp. 61-3″, J Polym Environ, Vol. 14(4), pp. 369-374, 2006.10Journal

9

Ken’ichiro MATSUMOTO, Emi AOKI, Kazuma TAKASE ,Yoshiharu DOI, Seiichi TAGUCHI:
In vivo and in vitro Characterization of Ser477X mutations in polyhydroxyalkanoate (PHA) synthase 1 from Pseudomonas sp. 61-3: effects of beneficial mutations on enzymatic activity, substrate specificity, and molecular weight of PHA”, Biomacromolecules, Vol. 7(8), pp. 2436-2442, 2006.08PubMed

8

Ken’ichiro MATSUMOTO, Rina NAGAO, Takaaki MURATA, Yuko ARAI, Tomoyasu KICHISE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA, Yoshiharu DOI:
“Enhancement of Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) Production in the Recombinant Arabidopsis thaliana by the in vitro Evolved Highly Active Mutants of Polyhydroxyalkanoate (PHA) synthase from Aeromonas caviae”,
Biomacromolecules, Vol. 6(4), pp. 2126-2130, 2005.PubMed

7

Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI, Yoshiharu DOI:
“Synergistic effects of Glu130Asp Substitution in the Type ・ Polyhydroxyalkanoate (PHA) Synthase: Enhancement of PHA Production and Alteration of Polymer Molecular Weight”,
Biomacromolecules, Vol. 6(1), pp. 99-104, 2005. 01PubMed

6

Kazuma TAKASE, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Yoshiharu DOI:
“Alteration of substrate chain-length specificity of type Ⅱsynthase for polyhydroxyalkanoate biosynthesis by in vitro evolution: in vivo and in vitro enzyme assays”,
Biomacromolecules, vol.5(2), pp. 480-485, 2004PubMed

5

Seiichi TAGUCHI, Hiromi MATSUSAKI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Kazunori TAGUCHI, Yoshiharu DOI:
“Biosynthesis of Biodegradable Copolyesters from Renewable Carbon Sources by Recombinant Bacteria”,
Polymer Internat., Vol. 51(10), pp. 899-906, 2002.Journal

4

Kumar SUDESH, Zhihua GAN, Ken’ichiro MATSUMOTO and Yoshiharu DOI:
“Direct Observation of Polyhydroxyalkanoate Chains by Atomic Force Microscopy”,

Ultramicroscopy, Vol. 91, 157-164, 2002.Journal
3

Ken’ichiro MATSUMOTO, Hiromi MATSUSAKI, Kazunori TAGUCHI, Minoru SEKI and Yoshiharu DOI:
“Isolation and Characterization of Polyhydroxyalkanoates Inclusions and Their Associated Proteins in Pseudomonas sp. 61-3″,
Biomacromolecules, Vol. 3, pp. 787-792, 2002.PubMed

2

Ken’ichiro MATSUMOTO, Sumiko NAKAE, Kazunori TAGUCHI, Hiromi MATSUSAKI, Minoru SEKI and Yoshiharu DOI:
“Biosynthesis of Poly(3-hydroxybutyrate-co-3-hydroxyalkanoates) Copolymer from Sugars by Recombinant Ralstonia eutropha Harboring the phaC1Ps and the phaGPs Genes of Pseudomonas sp. 61-3″,
Biomacromolecules, Vol. 2, pp. 934-939, 2001.Journal

1

Ken’ichiro MATSUMOTO, Hiromi MATSUSAKI, Seiichi TAGUCHI, Minoru SEKI, Yoshiharu DOI:
“Cloning and Characterization of the Pseudomonas sp. 61-3 phaG gene Involved in Polyhydroxyalkanoate Biosysnthesis”,
Biomacromolecules, Vol. 2, No. 1, pp. 142-147, 2001.PubMed

01

ああああ

Prof. Seiichi TAGUCHI

136

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, in press

135

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Enhanced cellular content and lactate fraction of the P(lactate-co-3-hydroxybutyrate) produced in recombinant Escherichia coli by the deletion of sigma factor RpoN”., J. Biosci. Bioeng., in press. Link

134

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, Vol.110, pp.44-49, 2014.12. Pubmed

133

Lucia SALAMANCA-CARDONA, Ryan A SCHEEL, Benjamin R LUNDGREN, Arthur J STIPANOVIC, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T NOMURA:”Deletion of the pflA gene in Escherichia coli LS5218 and its effects on the production of polyhydroxyalkanoates using beechwood xylan as a feedstock.”, Bioengineered., Vol. 5(5), pp.284-287, 2014.09-10. Pubmed

132

Ryan TAPPEL, Wenyang PAN, N. BERGEY, Qin WANG, Ivory PATTERSON, Obiajulu OZUMBA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher NOMURA:”Engineering Escherichia coli for improved production of short-chain-length-co-medium-chain-length poly[(R)-3-hydroxyalkanoate] (SCL-co-MCL PHA) copolymers from renewable non-fatty acid feedstocks”, ACS Sustainable Chemistry & Engineering., Vol.2(7). pp.1879-1887, 2014.05.Link

131

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

130

Jian YU, Daiki OGATA, ZuoQi GAI, Seiichi TAGUCHI, Isao TANAKA, Toshihiko OOI, Min YAO: “Structure of AzrA, AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism”, Acta Crystallographica Section D., Vol. 70, pp.553-564, 2014.02. Pubmed

129

Ken’ichiro MATSUMOTO, Yoshikazu TANAKA, Tsuyoshi WATANABE, Ren MOTOHASI, Koji IKEDA, Kota TOBITANI, Min YAO, Isao TANAKA, Seiichi TAGUCHI: “Directed evolution and structural analysis of NADPH-dependent acetoacetyl-CoA reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics”, Appl. Environ. Microbiol., Vol.79. pp.6134-6139 2013.10.Pubmed

128

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Pubmed

127

Anna OCHI, Ken’ichiro MATSUMOTO, Takashi OOBA, Kohei SAKAI , Takeharu TSUGE, Seiichi TAGUCHI: “Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”, Appl. Microbiol. Biotechnol., Vol.97, pp. 3441-3447, 2013.04. Pubmed

126

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”,
Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

125

Yuyang SONG, Ken’ichiro MATSUMOTO, Tsutomu TANAKA, Akihiko Kondo, Seiichi TAGUCHI: “Single-step production of polyhydroxybutyrate from starch by using α-amylase cell-surface displaying system of Corynebacterium glutamicum”, J. Biosci. Bioeng., Vol.115(1), pp.12-14, 2013.01. Pubmed

124

Jo-Ann Chuah, Miwa Yamada, Seiichi Taguchi, Sudesh Kumar, Yoshiharu Doi, Keiji Numata: “Biosynthesis and Characterization of Polyhydroxyalkanoate Containing 5-Hydroxyvalerate (5HV) Units: Effects of 5HV Units on Biodegradability, Cytotoxicity, Mechanical and Thermal Properties”, Polymer Degradation and Stability, Vol.98(1), pp.331-338, 2013.01 Journal

123

Ken’ichiro MATSUMOTO, Takehiro OKEI, Inori HONMA, Toshihiko OOI, Hirobumi AOKI, Seiichi TAGUCHI: “Efficient (R)-3-hydroxybutyrate production using acetyl-CoA regenerating pathway catalyzed by coenzyme A transferase”, Appl. Microbiol. Biotechnol., Appl. Microbiol. Biotechnol.,Vol.97(1),pp.205-210, 2012.05. Pubmed

122

Kenji TAJIMA, Xuerong HAN, Yasuharu SATOH, Ayako ISHII, Yuji ARAKI, Masanobu MUNEKATA, Seiichi TAGUCHI: “In vitro synthesis of polyhydroxyalokanoate (PHA) incorporating lactate (LA) with a block sequence by using a newly engineered thermostable Pseudomonas sp. SG4502 PHA synthase with acquired LA-polymerizing activity”, Appl. Microbiol. Biotechnol.,Vol94.(2),pp.365-376,2012.01. Pubmed

121

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., Vol. 93(5), pp.1919-1925, 2012.03. Pubmed

120

Yoriko WATANABE, Yousuke ICHINOMIYA, Daisuke SHIMADA, Azusa SAIKA, Hideki ABE, Seiichi TAGUCHI , Takeharu TSUGE: “Development and Validation of an HPLC-based Screening Method to Acquire Polyhydroxyalkanoate Synthase Mutants with Altered Substrate Specificity”, J. Biosci. Bioeng., Vol. 113(3), pp. 286-292, 2012.03. Pubmed

119

Toshihiko OOI, Daiki OGATA, Ken’ichiro MATSUMOTO, Gen NAKAMURA, Jian YU, Yao MIN, Masaya KITAMURA, Seiichi TAGUCHI, “Flavin-binding of azoreductase: Direct evidences for dual-binding property of apo-azoreductase with FMN and FAD”, J. Mol. Cat. B, Vol. 74(3-4), pp. 204-208, 2012.02. Link

118

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp. 70-72, 2012.01. Pubmed

117

Ken’ichiro MATSUMOTO, Ayako ISHIYAMA, Kohei SAKAI, Tetsufumi SHIBA, Seiichi TAGUCHI: “Biosynthesis of glycolate-based polyesters containing medium-chain-length 3-hydroxyalkanoates in recombinant Escherichia coli expressing engineered polyhydroxyalkanoate synthase”, J. Biotechnol., Vol.156(3), pp. 214-217, 2011.12. Pubmed

116

Xuerong HAN, Yasuharu SATOH, Toshifumi SATOH, Ken’ichiro MATSUMOTO, Toyoji KAKUCHI, Seiichi TAGUCHI, Tohru DAIRI, Masanobu MUNEKATA, Kenji TAJIMA: “Chemo-enzymatic synthesis of polyhydroxyalkanoate (PHA) incorporating 2-hydroxybutyrate by wild-type class I PHA synthase from Ralstonia eutropha“, Appl. Microbiol. Biotechnol., Vol. 92(3), pp. 509-517, 2011.11. Pubmed

115

Miwa YAMADA, Ken’ichiro MATSUMOTO, Shu URAMOTO, Ren MOTOHASHI, Hideki ABE, Seiichi TAGUCHI: “Lactate fraction dependent mechanical properties of semitransparent poly(lactate-co-3-hydroxybutyrate)s produced by control of lactyl-CoA monomer fluxes in recombinant Escherichia coli“, J. Biotechnol., Vol. 154(4), pp. 255-260, 2011.07. Pubmed

114

Kesaven BUHBALAN, Jo-Ann CHUAH, Fumi SHOZUI, Seiichi TAGUCHI, Christopher J. BRIGHAM, Anthony J. SINSKEY, K. Kumar SUDESH: “Characterization of the highly active PHA synthase of Chromobacterium sp. USM2″, Appl. Environ. Microbiol. Vol. 77(9), pp. 2926-2933, 2011.05. Pubmed

113

Ken’ichiro MATSUMOTO, Kenjiro MORIMOTO, Aoi GOHDA, Hiroaki SHIMADA, Seiichi TAGUCHI: “Improved polyhydroxybutyrate (PHB) production in transgenic tobacco by enhancing translation efficiency of bacterial PHB biosynthetic genes”, J. Biosci. Bioeng., Vol. 111(4), pp. 485-488, 2011.04. Pubmed

112

Ken’ichiro MATSUMOTO, Kei KITAGAWA, Sung-Jin JO, Yuyang SONG, Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2011.04. Pubmed

111

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. Pubmed

110

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Jian SUN, Seiichi TAGUCHI: “Biosynthesis of lactate(LA)-based polyester with a 96 mol% LA fraction and its application to stereocomplex formation”, Polymer Degradation and Stability, Vol. 96(4) pp. 499-504. 2011.02. Journal

109

Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Koji IKEDA, Tasuku KOMANOYA, Atsushi FUKUOKA, Seiichi TAGUCHI: “Chemo-microbial conversion of cellulose into polyhydroxybutyrate through ruthenium-catalyzed hydrolysis of cellulose into glucose”, Bioresource Technol., Vol. 102(3), pp. 3564-3567, 2011.02. Pubmed

108

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

107

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

106

Keiichi YOKOYAMA, Hiroe UTSUMI, Takefumi NAKAMURA, Daisuke OGAYA, Nobuhisa SHIMBA, Eiichiro SUZUKI, Seiichi TAGUCHI: “Screening for improved activity of a transglutaminase from Streptomyces mobaraensis created by a novel rational mutagenesis and random mutagenesis”, Appl. Microbiol. Biotechnol., Vol. 87(6), pp. 2087-2096, 2010.08. Pubmed

105

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI: “Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation inEscherichia coli LS5218″, Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

104

Tomohiro IMAMURA, Michiko YASUDA, Hiroaki KUSANO, Hideo NAKASHITA, Yuko OHNO, Takashi KAMAKURA, Seiichi TAGUCHI, Hiroaki SHIMADA: “Acquired resistance to the rice blast in transgenic rice accumulating the antimicrobial peptide thanatin”, Transgenic Research, Vol. 19(3), pp. 415-424, 2010.06. PubMed

103

Qin WANG, Alexander MUEllER, Ring Leong CHEAN, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T. NOMURA: “Quick and efficient method for genetic transformation of biopolymer producing bacteria”, J. Chem. Technol. Biotechnol., Vol. 85(6), pp. 775-778, 2010.06. Journal

102

Daiki OGATA, Toshihiko OOI, Takaaki FUJIWARA, Seiichi TAGUCHI, Isao TANAKA, Min YAO. : “Crystallization and preliminary X-ray studies of azoreductases from Bacillus sp.B29″ , Acta Crystallographica section F, Vol. 66(5), pp. 503-505, 2010.05. Pubmed

101

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04. PubMed

100

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., Vol. 86(5), pp. 1431-1438, 2010.04. PubMed

99

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. : “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

98

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol., Vol. 85(4), pp.949-954 , 2010.01 PubMed

97

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takahiro SASAKI, Seiichi TAGUCHI: “Engineering of polyhydroxyalkanoate synthase by Ser477X/Gln481X saturation mutagenesis for efficient production of 3-hydroxybutyrate-based copolyesters”, Appl. Microbial. Biotechnol., Vol. 84(6), pp.1117-1124, 2009.10. PubMed

96

Toshihiko OOI, Hirokazu SATO, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “A unique post-translational processing of an exo-β-1,3-glucanase of Penicillium sp. KH10 expressed in Aspergillus oryzae“. Protein Expression and Purification. 2009., Vol. 67(2), pp.126-131, 2009.08.PubMed

95

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. , Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

94

Toshihiko OOI, Takeshi SHIBATA, Ken’ichiro MATSUMOTO, Sinichi KINOSHITA, Seiichi TAGUCHI: “Comparative enzymatic analysis of azoreductases from Bacillus sp. B29″, Biosci. Biotechnol. Biochem., Vol. 73(5), pp.1209-1211, 2009.05.PubMed

93

Sung-Jin Jo, Chean Ring Leong, Ken’ichiro Matsumoto, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration.”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

92

Ken’ichiro MATSUMOTO, Takaaki MURATA, Rina NAGAO, Christopher NOMURA, Satoshi ARAI, Kazuma TAKASE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA: “Production of short-chain-length/medium-chain-length polyhydroxyalkanoate (PHA) copolymer in the plastid of Arabidopsis thaliana using the evolved 3-ketoacyl-acyl carrier protein synthase III”, Biomacromolecules, Vol.10(4), pp.686-690, 2009.04.PubMed

91

Ken’ichiro MATSUMOTO, Kazuma TAKASE, Yoko YAMAMOTO, Yoshiharu DOI, Seiichi TAGUCHI: “Chimeric enzyme composed of polyhydroxyalkanoate (PHA) synthases from Ralstonia eutropha and Aeromonas caviae enhances production of PHAs in recombinant Escherichia coli“, Biomacromolecules, Vol.10(4), pp.682-685, 2009.04.PubMed

90

Miwa YAMADA, Ken’ichiro MATSUMOTO, Takanori NAKAI, Seiichi TAGUCHI: “Microbial production of lactate-enriched poly[(R)-lactate-co-(R)-3-hydroxybutyrate] with novel thermal properties”, Biomacromolecules, Vol.10(4), pp.677-681, 2009.04.PubMed

89

Kenji TAJIMA, Yasuharu SATOH, Toshifumi SATOH, Rumi ITOH, Xuerong HAN, Seiichi TAGUCHI, Toyoji KAKUCHI, Masanobu MUNEKATA: “Chemo-enzymatic synthesis of poly(lactate-co-(3-hydroxybutyrate)) by a lactate-polymerizing enzyme”, Macromolecules, Vol. 42(6), pp.1985-1989, 2009.03Journal.

88

Ken’ichiro Matsumoto, Fumi SHOZUI, Yasuharu SATOH, Kenji TAJIMA, Masanobu MUNEKATA, and Seiichi TAGUCHI: “Kinetic analysis of engineered polyhydroxyalkanoates synthases with broad substrate specificity”, Polymer Journal., Vol. 41(3), pp.237-240, 2009.03Journal.

87

Seiichi Taguchi, Kensuke Mita, Kenta Ichinohe, and Shigeki Hashimoto: “Targeted engineering of the antibacterial peptide, apidaecin, based on an in vivo monitoring assay system”, Appl. Environ. Microbiol., Vol.75(5), pp.1460-1464, 2009.03PubMed

86

Takeharu TSUGE, Tetsuya YAMAMOTO, Kotaro YANO, Hideki ABE, Yoshiharu DOI, Seiichi TAGUCHI: “Evaluating the ability of polyhydroxyalkanoate synthase mutants to produce P(3HB-co-3HA) from soybean oil”, Macromol. Biosci., Vol. 9(1), pp.71-78, 2009.01PubMed

85

Seiichi TAGUCHI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Kenji TAJIMA, Yasuharu SATO, Masanobu MUNEKATA, Katsuhiro OHONO, Katsunori KOHDA, Takashi SHIMAMURA, Hiromi KAMBE, and Shusei OBATA: “A microbial factory for lactate-based polyesters using a lactate-polymerizing enzyme”, Proc. Natl. Acad. Sci. USA, Vol. 105 (45), pp. 17323-17327. 2008.11 PubMed

84

Kanako KUWASAKO, Naoshi DOHME, Mio INOUE, Mikako SHIROUZU, Seiichi TAGUCHI, Peter GUNTERT, Bertrand Seraphin, Yutaka MUTO, Shigeyuki YOKOYAMA: ”Complex assembly mechanism and an RNA-binding mode of the human p14-SF3b155 spliceosomal protein complex identified by NMR solution structure and functional analyses”, Proteins, Vol.71(4), pp.1617-1636, 2008.06PubMed

83

K. KUWASAKO, M. TAKAHASHI, N. TOCHIO, C. ABE, M. INOUE, T. TERADA, M. SHIROUZU, N. KOBAYASHI, T. KIGAWA, S. TAGUCHI, A. TANAKA, Y. HAYASHIZAKI, P. GUNTERT, Y. MUTO, S. YOKOYAMA: ”Solution Structure of the Second RNA Recognition Motif (RRM) Domain of Murine T Cell Intracellular Antigen-1 (TIA-1) and Its RNA Recognition Mode”, Biochemistry, Vol.47(24), pp.6437-6450, 2008.05PubMed

82

Christopher T. NOMURA, Tomoyo TANAKA, T.E. EGUEN, A.S. APPAH, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI S, Ortiz CL, Yoshiharu DOI:  “FabG mediates polyhydroxyalkanoate production from both related and nonrelated carbon sources in recombinant Escherichia coli LS5218″, Biotechnol. Prog., Vol.24(2), pp.342-351, 2008.04PubMed

81

Tomohiro IMAMURA, Naoki YAMAMOTO, Atsuo TAMURA, Shinji MURABAYASHI, Shigeki HASHIMOTO, Hiroaki SHIMADA, Seiichi TAGUCHI: ”NMR based structure- activity relationship analysis of an antimicrobial peptide, thanatin, engineered by site-specific chemical modification: activity improvement and spectrum alteration”, Biochem. Biophys. Res. Commun., Vol. 369(2), pp. 609-615, 2008.04 PubMed

80

Takeharu TSUGE, Shinko WATANABE, Daisuke SHIMADA, Hideki ABE, Yoshiharu DOI, and Seiichi TAGUCHI: ”Combination of N149S and D171G mutations in Aeromonas caviae PHA synthase and impact on polyhydroxyalkanoate biosynthesis” , FEMS Microbiology Letters, Vol. 277(2), pp. 217-222, 2007.12PubMed

79

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

78

Takeharu TSUGE, Shinko WATANABE, Shun SATO, Tomohiro HIRAISHI, Hideki ABE, Yoshiharu DOI, Seiichi TAGUCHI. : ”Variation in copolymer composition and molecular weight of polyhydroxyalkanoate generated by saturation mutagenesis of Aeromonas caviae PHA synthase” , Macromol. Biosci., Vol. 7(6), pp. 846-854, 2007.05PubMed

77

Miwa YAMADA, Akiko WAKUDA, Seiichi TAGUCHI : “Morphological Change in Cellular Granule Formation of Poly[(R)-3-hydroxybutyrate] Caused by DNA-Binding-Related Mutations of an Autoregulated Repressor PhaR”, Biosci. Biotechnol. Biochem., Vol. 71(6), 1572-1576, 2007.06 PubMed

76

Toshihiko OOI, Takeshi SHIBATA, Reiko SATO, Hiroaki OHNO, Sinichi KINOSHITA, Tran Linh Thnoc, Seiichi TAGUCHI: “An azoreductase, aerobic NADH-dependent flavoprotein discovered from Bacillus sp.: functional expression and enzymatic characterization”, Appl. Microbiol. Biotechnol., Vol. 75(2), pp. 377-386, 2007.05PubMed

75

Hideki WATANABE, Kouhei TSUMOTO, Seiichi TAGUCHI, Kouichi YAMASHITA, Yoshiharu DOI, Yoshiyuki NISHIYAMA, Hidemasa KONDO, Mitsuo UMETSU, and Izumi KUMAGAI: “A human antibody fragment with high affinity for biodegradable polymer film”, Bioconjugate Chem., Vol. 18(3), pp. 645-651, 2007.05PubMed

74

Miwa YAMADA, Koichi YAMASHITA, Akiko WAKUDA, Kazuyoshi ICHIMURA, Akira MAEHARA, Michihisa MAEDA, and Seiichi TAGUCHI: “Autoregulator protein PhaR for biosynthesis of polyhydroxybutyrate [P(3HB)]  possibly has two separate domains that bind to the target DNA and P(3HB): functional mapping of amino acid residues responsible for DNA binding.”, J. Bacteriol., Vol. 189(3), pp. 1118-1127, 2007.02PubMed

73

Tomohiro HIRAISHI, Yoko HIRAHARA, Yoshiharu DOI, Mizuo MAEDA, Seiichi TAGUCHI: “Effects of mutations in the substrate-binding domain of poly[(R)-3-hydroxybutyrate] (PHB) depolymerase from Ralstonia pickettii T1 on PHB degradation”, Appl. Environ. Microbiol., Vol. 72(11), pp. 7331-7338, 2006.11PubMed

72

Ken’ichiro MATSUMOTO, Yuko ARAI, Rina NAGAO, Takeshi MURATA, Kazuma TAKASE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA, Yoshiharu DOI:
“Synthesis of short-chain-length/medium-chain length polyhydroxyalkanoate (PHA) copolymers in peroxisome of the transgenic Arabidopsis thaliana harboring the PHA synthase gene from Pseudomonas sp. 61-3″, J. Polym. Environ., Vol. 14(4), pp. 369-374, 2006.10Journal

71

Sung-Jin JO, Michihisa MAEDA, Toshihiko OOI,  Seiichi TAGUCHI: “Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum.” J. Biosci. Bioeng., Vol. 102, pp. 233-236, 2006.09PubMed

70

Ken’ichiro MATSUMOTO, Emi AOKI, Kazuma TAKASE ,Yoshiharu DOI, Seiichi TAGUCHI:
In vivo and in vitro characterization of Ser477X mutations in polyhydroxyalkanoate (PHA) synthase 1 from Pseudomonas sp. 61-3: Effects of beneficial mutations on enzymatic activity, substrate specificity, and molecular weight of PHA”, Biomacromolecules, Vol. 7(8), pp. 2436-2442, 2006.08PubMed

69

Koichi YAMASHITA, Miwa YAMADA, Keiji NUMATA, Seiichi TAGUCHI:
“Nonspecific hydrophobic interactions of a repressor protein, PhaR, with poly[(R)-3-hydroxybutyrate] film studied with a quartz crystal microbalance”, Biomacromolecules, Vol. 7(8), pp. 2449-2454, 2006.08PubMed

68

Yahaya Mohd NORMI, Tomohiro HIRAISHI, Seiichi TAGUCHI, Hideki ABE, Kumar SUDESH, Nazalan NAJIMUDIN, Yoshiharu DOI:
“Site-directed saturation mutagenesis of residue F420 and recombination of beneficial mutations of Ralstonia eutropha PHA synthase: analysis of mutational effects on poly(3-hydroxybutyrate) and PHA synthase”,
Biotech. Lett., Vol.27, pp. 705-712, 2005.07PubMed

67

Ken’ichiro MATSUMOTO, Rina NAGAO, Takaaki MURATA, Yuko ARAI, Tomoyasu KICHISE, Hideo NAKASHITA, Seiichi TAGUCHI, Hiroaki SHIMADA, Yoshiharu DOI:
“Enhancement of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production in the recombinant Arabidopsis thaliana by the in vitro evolved highly active mutants of polyhydroxyalkanoate (PHA) synthases from Aeromonas caviae”,
Biomacromolecules, Vol.6, No.4, pp. 2126-2130, 2005.07PubMed

66

Yahaya Mohd NORMI, Tomohiro HIRAISHI, Seiichi TAGUCHI, Hideki ABE, Kumar SUDESH, Nazalan NAJIMUDIN, Yoshiharu DOI:
“Characterization and properties of G4X mutants of Ralstonia eutropha PHA synthase for poly(3-hydroxybutyrate) biosynthesis in Escherichia coli”,
Macromol. Biosci., Vol.5, No.3, pp. 197-206, 2005.03PubMed

65

Takeharu TSUGE, Kotaro YANO, Shin-ichi IMAZU, Keiji NUMATA, Yoshihiro KIKKAWA, Hideki ABE, Seiichi TAGUCHI, Yoshiharu DOI:
“Biosynthesis of polyhydoroxyalkanoate(PHA) copolymer from fructose using wild-type and laboratory-evolved PHA synthases”,
Macromol. Biosci., Vol.5, No.2, pp. 112-117, 2005. 02PubMed

64

Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI, Yoshiharu DOI:
“Synergistic effects of Glu130Asp substitution in the type Ⅱ polyhydroxyalkanoate (PHA) synthase: enhancement of PHA production and alteration of polymer molecular weight”,
Biomacromolecules, Vol.6, No.1, pp. 99-104, 2005. 01PubMed

63

Kazuma TAKASE, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Yoshiharu DOI:
“Alteration of substrate chain-length specificity of type ・ synthase for polyhydroxyalkanoate biosynthesis by in vitro evolution: in vivo and in vitro enzyme assays”,
Biomacromolecules, vol.5, No.2, pp. 480-485, 2004.03/4PubMed

62

Christopher T. NOMURA, Kazunori TAGUCHI, Seiichi TAGUCHI, Yoshiharu DOI:
“Coexpression of genetically engineered 3-ketoacyl-ACP synthase Ⅲ(fabH) and polyhydroxyalkanoate synthase (phaC) genes leads to short-chain-length-medium-chain-length polyhydroxyalkanoate copolymer production from glucose in Escherichia coli JM109″,
Appl. Environ. Mricrobiol., Vol. 70, No.2, pp. 999-1007, 2004.02PubMed

61

Takeharu TSUGE, Shin-ichi IMAZU, Kazuma TAKASE, Seiichi TAGUCHI, Yoshiharu DOI:
“An extra large insertion in the polyhydroxyalkanoate synthase from Delftia acidovorans DS-17: its deletion effects and relation to cellular proteolysis”,
FEMS Microbiol. Lett., Vol. 231, No.1, 77-83, 2004.02PubMed

60

Takeharu TSUGE, Tamao HISANO, Seiichi TAGUCHI, Yoshiharu DOI;
“Alteration of chain length substrate specificity of Aeromonas cavie(R)-specific enoyl-CoA hydratase through site-directed mutagenesis”,
Appl.Enviorn. Microbiol., Vol. 16, No.2, pp. 107-113, 2003.11PubMed

59

Yoichi SUZUKI, Seiichi TAGUCHI, Tamao HISANO, Kazunobu TOSHIMA, Shuichi MATSUMURA, Yoshiharu DOI:
“Correlation between structure of the lactones and substrate specificity in enzyme-catalyzed polymerization for the synthesis of polyesters”,
Biomacromolecules, Vol. 4, 537-543, 2003.05PubMed

58

Seiichi TAGUCHI, Hirofumi NAKAMURA, Tomoyasu KICHISE, Takeharu TSUGE, IchiroYAMATO, Yoshiharu DOI:
“Production of polyhydroxyalkanoate (PHA) from renewable carbon sources in recombinant Ralstonia eutropha using mutants of original PHA synthase”,
Biochem. Eng. J., Vol.16, pp. 107-113, 2003.02Journal

57

Kazuma TAKASE, Seiichi TAGUCHI, Yoshiharu DOI:
“Enhanced synthesis of poly(3-hydroxybutyrate) in recombinant Escherichia coli by means of error-prone PCR mutagenesis, saturation mutagenesis and in vitro recombination of type II polyhydroxyalkanoate synthase gene”,
J. Biochem., Vol. 133, No.1, pp. 139-145, 2003.01PubMed

56

Takeharu TSUGE, Kazunori TAGUCHI, Seiichi TAGUCHI, Yoshiharu DOI:
” Molecular characterization and properties of (R)-specific enoyl-CoA hydratases from Pseudomonas aeruginosa: metabolic tools for synthesis of designed polyhydroxyalkanoate via fatty acid β-oxidation”,
Int. J. Biol. Macromol., Vol. 31, No.4/5, pp. 195-205, 2003.01PubMed

55

Seiichi TAGUCHI, Kumiko ARAKAWA, Keiichi YOKOYAMA, Shino TAKEHANA, Hiroshi TAKAGI, Haruo MOMOSE:
“Overexpression and purification of microbial pro-transglutaminase from Streptomyces cinnamoneum and in vitro processing by Streptomyces albogriseolus proteases”,
J. Biosci. Bioengin., Vol. 94, No.5, pp. 478-481, 2002.11PubMed

54

Seiichi TAGUCHI, Hiromi MATSUSAKI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Kazunori TAGUCHI, Yoshiharu DOI:
“Biosynthesis of biodegradable copolyesters from renewable carbon sources by recombinant bacteria”,
Polymer Internat., Vol. 51, No.10, pp. 899-906, 2002.10Journal

53

Akira MAEHARA, Seiichi TAGUCHI, Tatsuaki NISHIYAMA, Tsuneo YAMANE, Yoshiharu DOI:
“A repressor protein, PhaR, regulates PHA synthesis via its direct interaction with PHA”,
J. Bacteriol., Vol. 184, No.14, pp. 3992-4002, 2002.07PubMed

52

Seiichi TAGUCHI, Hirofumi NAKAMURA, Tomohiro HIRAISHI, Ichiro YAMATO, Yoshiharu DOI:
“In vitro evolution of a polyhydroxybutyrate synthase by intragenic suppression-type mutagenesis”,
J. Biochem., Vol. 131, No.6, pp. 801-806, 2002.06PubMed

51

Akira ARISAWA, Motoko MATSUFUJI, Takashi NAKASHIMA, Kazuyuki DOBASHI, Kuniko ISSIKI, Takeo YOSHIOKA, Shigeru YAMADA, Haruo MOMOSE, Seiichi TAGUCHII:
“Streptomyces serine protease (DHP-A) as a new biocatalyst capable of forming chiral intermediates of 1, 4-hydropyridine calcium antagonists”,
Appl. Environ. Microbiol., Vol. 68, No.6, pp. 2716-2725, 2002.06PubMed

50

Tomoyasu KICHISE, Seiichi TAGUCHI, Yoshiharu DOI:
“Enhanced accumulation and changed monomer composition in polyhydroxyalkanoate (PHA) copolyester by in vitro evolution of Aeromonas caviae PHA polymerase”,
Appl. Environ. Microbiol., Vol. 68, No.5, pp. 2411-2419, 2002.05PubMed

49

Yoichi SUZUKI, Seiichi TAGUCHI, Terumi SAITO, Kazunobu TOSHIMA, Shuichi MATSUMURA, Yoshiharu DOI:
“Involvement of catalytic amino acid residues in enzyme-catalyzed polymerization”,
Biomacromolecules, Vol. 2, No.2, pp. 541-544, 2001.06Journal

48

Seiichi TAGUCHI, Akira MAEHARA, Kazuma TAKASE, Maki NAKAHARA, Hirofumi NAKAMURA, Yoshiharu DOI:
“Analysis of mutational effects of a polyhydroxybutyrate (PHB) polymerase on bacterial PHB accumulation using an in vivo assay system”,
FEMS Microbiol. Lett. Vol. 198, No. 1, pp. 65-71, 2001.04 Journal

47

Ken’ichiro MATSUMOTO, Hiromi MATSUSAKI, Seiichi TAGUCHI, Minoru SEKI, Yoshiharu DOI:
“Cloning and characterization of the Pseudomonas sp. 61-3 phaG gene involved in polyhydroxyalkanoate biosysnthesis”,
Biomacromolecules, Vol. 2, No.1, pp. 142-147, 2001.03PubMed

26

Seiichi TAGUCHI, Masayuki SUZUKI, Shuichi KOJIMA, Kinichiro MIURA, Haruo MOMOSE:
“Streptomyces serine protease (SAM-P20): Recombinant production, characterization, and interaction with endogenous protease inhibitor”,
J. Bacteriol., Vol. 177, No. 22, pp. 6638-6643, 1995.11

25

Seiichi TAGUCHI, Takeshi ENDO, Yumiko NAOI, Haruo MOMOSE:
“Molecular cloning and sequence analysis of a gene encoding an extracellular serine protease from Streptomyces lividans 66”,
Biosci. Biotech. Biochem., Vol. 59, No. 7, pp. 1386-1388, 1995.07

24

Seiichi TAGUCHI, Satoru MISAWA, Yasuto YOSHIDA, Haruo MOMOSE:
“Microbial secretion of biologically active human transforming growth factor α fused to the Streptomyces protease inhibitor”,
Gene, Vol. 159, No. 2, pp. 239-243, 1995.07

23

Mahito TERABE, Shuichi KOJIMA, Seiichi TAGUCHI, Haruo MOMOSE, Kinichiro MIURA:
“A subtilisin inhibitor produced by Streptomyces bikiniensis possesses a glutamine residue at reactive site P1”,
J. Biochem., Vol. 117, No. 3, pp. 609-613, 1995.03

22

Seiichi TAGUCHI, Ayako ODAKA, Yoshiharu WATANABE, Haruo MOMOSE:
“Molecular characterization of a gene encoding extracellular serine protease isolated from a subtilisin inhibitor-deficient mutant of Streptomyces albogriseolus S-3253”,
Appl. Environ. Microbiol., Vol. 61, No. 1, pp. 180-186, 1995.01

21

Mahito TERABE, Shuichi KOJIMA, Seiichi TAGUCHI, Haruo MOMOSE, Kinichiro MIURA:
“Primary structure and inhibitory properties of subtilisin-chymotrypsin inhibitor from Streptomyces virginiae”,
Eur. J. Biochem. Vol. 226, No. 2, pp. 627-632, 1994.12

20

Mahito TERABE, Shuichi KOJIMA, Seiichi TAGUCHI, Haruo MOMOSE, Kinichiro MIURA:
“Three novel subtilisin-trypsin inhibitors from Streptomyces: primary structures and inhibitory properties”,
J. Biochem., Vol. 116, No. 5, pp. 1156-1163, 1994.11

20

Seiichi TAGUCHI, Kanako KUWASAKO, Atsushi SUENAGA, Miyuki OKADA, Haruo MOMOSE:
“Functional mapping against Escherichia coli for the broad spectrum antimicrobial peptide, thanatin, based on the in vivo monitoring assay system”,
J. Biochemistry, Vol. 128, No. 5, pp. 745-754, 2000.11

19

Shuichi KOJIMA, Mahito TERABE, Seiichi TAGUCHI, Haruo MOMOSE, Kinichiro MIURA:
“Primary structure and inhibitory properties of a proteinase inhibitor produced by Streptomyces cacaoi ”,
Biochim. Biophys. Acta, Vol. 1207, No. 1, pp. 120-125, 1994.07

19

Seiichi TAGUCHI, Keiichiro NISHIHAMA, Keiko IGI, Kotaro Ito, Hiroko TAIRA, Masao MOTOKI, Haruo MOMOSE:
“Substrate specificity analysis of microbial transglutaminase by using proteinaceious protease inhibitors (SILs) as natural model substrates”,
J. Biochemistry, Vol. 128, No. 3, pp. 415-425, 2000.09

18

Seiichi TAGUCHI, Koichi NAKAGAWA, Masafumi MAENO, Haruo MOMOSE:
“In vivo monitoring system for structure-function relationship analysis of the antibacterial peptide Apidaecin”,
Appl. Environ. Microbiol., Vol. 60, No. 10, pp. 3566-3572, 1994.10

18

Seiichi TAGUCHI, Shingo KOMADA, Haruo MOMOSE:
“The complete amino acid substitutions at position 131 that is positively involved in cold adaptation of subtilisin BPN’”,
Appl. Environ. Microbiol., Vol. 66, No. 4, pp. 37-42, 2000.04

17

Tomoko TANGE, Seiichi TAGUCHI, Haruo MOMOSE:
“Improvement of a useful enzyme (subtilisin BPN’) by an experimental evolution system”,
Appl. Microbiol. Biotech., Vol. 41, No. 2, pp. 239-244, 1994.04

17

Takeharu TSUGE,Toshiaki FUKUI, Hiromi Matsusaki, Seiichi TAGUCHI, Genta KOBAYASHI, Ayaaki ISHIZAKI, Yoshiharu Doi:
“Molecular cloning of two (R)-specific enoyl CoA hydratase genes from Pseudomonas aeruginosa and their use for polyhydroxyalkanoate biosynthesis”,
FEMS Microbiol. Lett., Vol. 184, No. 1, pp. 193-198, 2000.03

16

Seiichi TAGUCHI, Shuichi KOJIMA, Mahito TERABE, Kinichiro MIURA, Haruo MOMOSE,:
“Comaparative studies on the primary structures and inhibitory properties of subtilisin-trypsin inhibitors from Streptomyces”,
Eur. J. Biochem. Vol. 220, No. 3, pp. 911-918, 1994.03

16

Hiroaki SASAKAWA, Atsuo TAMURA, Shinichi FUJIMAKI, Seiichi TAGUCHI, Kazuyuki AKASAKA:
“Secondary structures and structural fluctuation in a dimer protein, Streptomyces subtilisin inhibitor”,
J. Biochemistry, Vol. 126, No. 5, pp. 859-865, 1999.11

15

Seiichi TAGUCHI, Hideki KIKUCHI, Masayuki SUZUKI, Shuichi KOJIMA, Mahito TERABE, Kinichiro MIURA, Takashi NAKASE, Haruo MOMOSE:
“Streptomyces subtilisin inhibitor- like proteins are distributed widely in streptomycetes”,
Appl. Environ. Microbiol., Vol. 59, No. 12, pp. 4338-4341, 1993.12

15

Seiichi TAGUCHI, Akiyoshi OZAKI, Takamasa NONAKA, Yukio MITSUI, Haruo MOMOSE:
“A cold-adapted protease engineered by experimental evolution system”,
J. Biochemistry, Vol. 126, No. 4, pp.689-693, 1999.10

14

Masafumi MAENO, Seiichi TAGUCHI, Haruo MOMOSE:
“Production of antibacterial peptide ‘Apidaecin’ using the secretory expression system of Streptomyces”,
Biosci. Biotech. Biochem., Vol. 57, No. 7, pp. 1206-1207, 1993.07

14

Hiroaki SASAKAWA, A. TAMURA, K. AKASAKA, S. TAGUCHI, Yoko MIYAKE, Masatsune KAINOSHO:
“Backbone 1H, 13C and 15N resonance assignments of Streptomyces subtilisin inhibitor”,
J. Biomolecular NMR, Vol. 14, No. 3, pp. 285-286, 1999.07

13

Seiichi TAGUCHI, Yasuto YOSHIDA, Kosuke MATSUMOTO, Haruo MOMOSE:
“Improved leader and putative terminator sequences for high-level production of Streptomyces subtilisin inhibitor in Escherichia coli ”,
Appl. Microbiol. Biotech. Vol. 39, No. 6, pp. 732-737, 1993.08

13

Seiichi TAGUCHI, Takahiro OGAWA, Takeshi ENDO, Haruo MOMOSE:
“Identification of a structural gene encoding a metallothionein-like domain that includes a putative regulator protein for Streptomyces protease gene expression”,
Biosci. Biotech. Biochem., Vol. 62, No. 12, pp. 2476-2479, 1998.12

12

Seiichi TAGUCHI, Hideki KIKUCHI, Shuichi KOJIMA, Izumi KUMAGAI, Takashi NAKASE, Kinichiro MIURA, Haruo MOMOSE:
“High frequency of SSI-like protease inhibitors among Streptomyces”,
Biosci. Biotech. Biochem., Vol. 57, No. 3, pp. 522-524, 1993.03

12

Yoshiaki MIYOTA, S. KOMADA, H. MOMOSE, Seiichi TAGUCHII:
“Quantitative assay system for specific enzyme activity using antibody: the case of protease, subtilisin BPN’”,
J. Biotechnology Vol. 66, No. 2/3, pp.157-163, 1998.12

11

Yoshitaka UEDA, Seiichi TAGUCHI, Kenichi NISHIYAMA, Izumi KUMAGAI, Kinichiro MIURA:
“Effect of a rare leucine codon, TTA, on expression of a foreign gene in Streptomyces lividans”,
Biochim. Biophys. Acta, Vol. 1172, No. 3, pp. 262-266, 1993.03

11

Seiichi TAGUCHI, Shigeru YAMADA, Shuichi KOJIMA, Haruo MOMOSE:
“An endogenous target protease, SAM-P26, of Streptomyces protease inhibitor (SSI): purification, primary structure determination and enzymatic characterization”,
J. Biochemistry Vol. 124, No. 4, pp.804-810, 1998.10

10

Seiichi TAGUCHI, Yasuto YOSHIDA, Izumi KUMAGAI, Kinichiro MIURA, Haruo MOMOSE:
“Effect of downstream message secondary structure on the secretory expression of the Streptomyces subtilisin inhibitor”,
FEMS Microbiol. Lett., Vol. 107, No. 2&3, pp. 185-190, 1993.03

10

Seiichi TAGUCHI, Philippe BULET, Jules A. HOFFMANN:
“A novel insect defensin from the ant Formica rufa”,
Biochimie, Vol. 80, No. 4, pp. 343-346, 1998.04

9

Seiichi TAGUCHI, Shuichi KOJIMA, Izumi KUMAGAI, Hiroshi OGAWARA, Kinichiro MIURA, Haruo MOMOSE:
“Isolation and partial characterization of SSI-like protease inhibitors from Streptomyces”,
FEMS Microbiol. Lett., Vol. 99, pp. 293-298, 1992

9

Seiichi TAGUCHI, Akiyoshi OZAKI, Haruo MOMOSE:
“Engineering of a cold-adapted protease by sequential random mutagenesis and a screening system”,
Appl. Environ. Microbiol. , Vol. 64, No. 2, pp. 492-495, 1998.02

8

Seiichi TAGUCHI, Keisuke FURUKAWA, Haruo, MOMOSE, Michimasa KISHIMOTO:
“Optimization of the microbial production of a protein (SSI) using an indicator host-vector system”,
J. Ferment. Bioengin., Vol. 73, No.4, pp. 317-318, 1992.04

8

Seiichi TAGUCHI, Takahiro OGAWA, Takeshi ENDO, Haruo MOMOSE:
“A gene homologous to the Streptomyces chymotrypsin-like protease (SAM-20) gene is tandemly located”,
Biosci. Biotech. Biochem., Vol. 61, No. 5, pp. 909-913, 1997.05

7

Seiichi TAGUCHI, Masafumi MAENO, Haruo MOMOSE:
“Extracellular production system of heterologous peptide driven by a secretory protease inhibitor of Streptomyces”,
Appl. Microbiol. Biotechnol., Vol. 36, No. 6, pp. 749-753, 1992.03

7

Seiichi TAGUCHI, Shuichi KOJIMA, Mahito TERABE, Yoshinori KUMAZAWA, Hiroshi KOHRIYAMA, Masayuki SUZUKI, Kinichiro MIURA, Haruo MOMOSE:
“Molecular phylogenetic characterization of Streptomyces protease inhibitor family”,
J. Mol. Evol., Vol. 44, No. 5, pp. 542-551, 1997.05

6

Seiichi TAGUCHI, Kenichi NISHIYAMA, Izumi KUMAGAI, Haruo MOMOSE, Kinichiro MIURA:
“Relationship between utilization of dual translational initiation signals and protein processing in Streptomyces”,
Mol. Gen. Genet., Vol. 226, No. 1&2, pp. 328-331, 1991.04

6

Hidenori KANO, Seiichi TAGUCHI, Haruo MOMOSE:
“Cold adaptation of a mesophilic serine protease, subtilisin, by in vitro random mutagenesis”,
Appl. Microbiol. Biotech., Vol. 47, No. 1, pp. 46-51, 1997.01

5

Seiichi TAGUCHI, Izumi KUMAGAI, Kinichiro MIURA:
“Comparison of secretory expression in Escherichia coli and Streptomyces of Streptomyces subtilisin inhibitor (SSI) gene”,
Biochim. Biophys. Acta, Vol. 1049, No. 3, pp. 278-285, 1990.07

5

Masayuki SUZUKI, Seiichi TAGUCHI, Shigeru YAMADA, Shuichi KOJIMA, Kinichiro MIURA, Haruo MOMOSE:
“A novel member of subtilisin-like protease family from Streptomyces albogriseolus”,
J. Bacteriol., Vol. 179, No. 2, pp. 430-438, 1997.01

4

Seiichi TAGUCHI, Izumi KUMAGAI, Jiro NAKAYAMA, Akinori SUZUKI, Kinichiro MIURA:
“Efficient extracellular expression of a foreign protein in Streptomyces using secretory protease inhibitor (SSI) gene fusions”,
Bio/Technology (now Nature Biotechnology) Vol. 7, No. 7, pp. 1063-1066, 1989.07

4

Seiichi TAGUCHI, Akiyoshi OZAKI, Koichi Nakagawa, Haruo MOMOSE:
“Functional mapping of amino acid residues responsible for antibacterial action of apidaecin”,
Appl. Environ. Microbiol., Vol. 62, No. 12, pp. 4652-4655, 1996.12

3

Seiichi TAGUCHI, Kenichi NISHIYAMA, Izumi KUMAGAI, Kinichiro MIURA:
“Analysis of transcriptional control regions in the Streptomyces subtilisin-inhibitor-encoding gene”,
Gene, Vol. 84, pp. 279-286, 1989

3

Akinori KURAMOTO, Alexander LEZHAVA, Seiichi TAGUCHI, Haruo MOMOSE, Haruyasu KINASHI:
“The location and deletion of the genes which code for SSI-like protease inhibitors in Streptomyces species by pulsed-field gel electrophoresis”, FEMS Microbiol. Lett.,
Vol. 139, No. 1, pp. 37-42, 1996.05

2

Shusei OBATA, Seiichi TAGUCHI, Izumi KUMAGAI, Kinichiro MIURA:
“Molecular cloning and nucleotide sequence determination of gene encoding Streptomyces subtilisin inhibitor (SSI)”,
J. Biochem., Vol. 105, pp. 367-371, 1989

2

Mahito TERABE, Shuichi KOJIMA, Seiichi TAGUCHI, Haruo MOMOSE,Kinichiro MIURA:
“New subtilisin-trypsin inhibitors produced by Streptomyces: primary structures and their relationship to other proteinase inhibitors from Streptomyces”,
Biochim. Biophys. Acta, Vol. 1292, No.2, pp. 233-240, 1996.02

1

Kinichiro MIURA, Izumi KUMAGAI, Shusei OBATA, Shuichi KOJIMA, Seiichi TAGUCHI:
“Partial alteration of a protein Streptomyces subtilisin inhibitor by site-directed mutagenesis”,
Proc. Japan Acad., Vol. 64, No. 6, pp. 147-149, 1988

1

Seiichi TAGUCHI, Shuichi KOJIMA, Kinichiro MIURA, Haruo MOMOSE:
“Taxonomic characterization of closely related Streptomyces spp. based on the amino acid sequence analysis of protease inhibitor proteins”,
FEMS Microbiol. Lett., Vol. 135, pp. 169-173, 1996.01

Assist. Prof. Chiaki Hori

27

Watanabe T, Kojima H, Umezawa K, Hori C, Takasuka T, Kato Y, Fukui M. Genomes of neutrophilic sulfur-oxidizing chemolithoautotrophs representing 9 proteobacterial species from 8 genera. Frontiers in Microbiology. in press

26

Mutuku JM, Cui S, Hori C, Takeda Y, Tobimatsu Y, Nakabayashi R, Mori T, Saito K, Demura T, Umezawa T, Yoshida S, Shirasu K. The structure of lignin deposited after infection is crucial for Striga hermonthica resistance. Plant Physiol. in press

 

25

Hori C, Yamazaki T, Ribordy G, Takisawa K, Matsumoto K, Ooi T, Zinn M, Taguchi S. High-cell density culture of poly(lactate-co-3-hydroxybutyrate)-producing Escherichia coli by using glucose/xylose-switching fed-batch jar fermentation.  J Biosci Bioeng., in press

 

24

Sakuragi S, Hori C, Igarashi K, Samejima M.: Secretome analysis of the basidiomycete Phanerochaete chrysosporium grown on ammonia-treated lignocellulosic biomass from birch wood.  Journal of Wood Science, 64(6), 845-853: DOI, 10.1007/s10086-018-1770-4

23

Hori C, Gaskell J, Cullen D, Sabat G, Stewart PE, Lail K, Peng Y, Barry K, Grigoriev IV, Kohler A, Fauchery L, Martin F, Zeiner CA, Bhatnagar JM.: Multi-omic analyses of extensively decayed Pinus contorta reveal expression of diverse array of lignocellulose degrading enzymes. Appl Environ Microbiol. 2018 84(20): Doi: 10.1128/AEM.01133-18.

*Spotlight research

22

Kumakura* and Hori C*, Matsuoka H, Igarashi K, Samejima M. Protein components of water extracts from fruiting bodies of the Reishi mushroom Ganoderma lucidum contribute to the production of functional molecules. Journal of the Science of Food and Agriculture.99(2):529-535 2019

*Equal contribution 

21

Matsumoto K,Iijima M, Hori C, Utsunomia C, Ooi T, and Taguchi S.: “In Vitro Analysis of D‐Lactyl-CoA-Polymerizing Polyhydroxyalkanoate Synthase in Polylactate and Poly(lactate-co-3 hydroxybutyrate) Syntheses”, Biomacromolecules 19(7):2889-2895.

20

Hori C, Oishi K, Matsumoto K, Taguchi S, Ooi T.: Site-directed saturation mutagenesis of polyhydroxylalkanoate synthase for efficient microbial production of poly[(R)-2-hydroxybutyrate], J Biosci Bioeng., 125(6):632-636

19

Matsumoto K, Hori C, Fujii R, Takaya M, Ooba T, Ooi T, IsonoT, Satoh T, Taguchi S.: “Dynamic changes of intracellular monomer levels regulate block sequence of polyhydroxyalkanoates in engineered Escherichia coli.”, Biomacromolecules, Vol.19(2), pp.662-671, 2018.

18

Ueta M, Hori C, Tamai Y, Yamagishi Y, Miyamoto T, Sano Y. Changes in secondary xylem of the stem of four tree species in response to inoculation with Perenniporia fraxinea. Mokuzaigakkaishi Vol.64(1), pp.1-9, 2018.

17

Utsunomia, C., Saito, T.,  Matsumoto, K., Hori, C., Isono, T., Satoh, T., Taguchi, S. Synthesis of lactate (LA)-based poly(ester-urethane) using hydroxyl-terminated LA-based oligomers from a microbial secretion system. J. Polym. Res. Vol. 24, pp.167-172, 2017.

16

Utsunomia, C., Hori, C., Matsumoto, K., Taguchi, S.: “Investigation of the Escherichia coli membrane transporters involved in the secretion of D-lactate-based oligomers by loss-of-function screening” J Biosci Bioeng., Vol.124 (6),  pp.635-640, 2017.

15

Utsunomia, C., Matsumoto, K., Date, S., Hori, C., Taguchi, S.: “Microbial secretion of lactate-enriched oligomers for efficient conversion into lactide: A biological shortcut to polylactide”, J Biosci Bioeng., in press

14

Yoshimi, Y., Sugawara, Y., Hori, C., Igarashi, K., Kaneko, S., Tsumuraya, Y., Kotake, T.: “A protease/peptidase from culture medium of Flammulina velutipes that acts on arabinogalactan-protein.” Bioscience, Biotechnology, and Biochemistry, Vol.25, pp.1-7, 2016.

13

Song, X., Yu, X., Hori, C., Demura, T., Ohtani, M., Zhuge, Q. Heterologous overexpression of poplar SnRK2 genes enhanced salt stress tolerance in Arabidopsis thaliana. Frontiers in Plant Science Vol.7(612), pp.1-11, 2016.

12

Song, X., Ohtani, M, Hori, C., Takebayashi, A., Hiroyama, R., Rejab, N.A., Suzuki, T., Demura, T., Yin, T., Yu, X., Zhuge, Q.: “Physical interaction between SnRK2 and PP2C is conserved in Populus trichocarpa.” Plant Biotechnology, Vol.32, pp.337-341, 2015.

11

Hori, C., Ishida, T., Igarashi, K., Samejima, M., Suzuki, H., Master, E., Ferreira, P., Ruiz-Dueñas, F.J., Held, B., Canessa, P., Larrondo, L.F., Schmoll, M., Druzhinina, I.S., Kubicek, C.P., Gaskell, J.A., Kersten, P., St John, F., Glasner, J., Sabat, G., Splinter, BonDurant S., Syed, K., Yadav, J., Mgbeahuruike, A.C., Kovalchuk, A., Asiegbu, F.O., Lackner, G., Hoffmeister, D., Rencoret, J., Gutiérrez, A., Sun, H., Lindquist, E., Barry, K., Riley, R., Grigoriev, I.V., Henrissat, B., Kües, U., Berka, R.M., Martínez, A.T., Covert, S.F., Blanchette, R.A., Cullen, D.: “Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome gives insight into its pioneer colonization strategies of wood.” PLOS genetics, Vol.10(12), pp.e1004759, 2014.

10

Hori, C., Gaskel, J., Igarashi, K., Kersten P., Mozuch M., Samejima M., Cullen D.: “Temporal alterations in the secretome of the selective ligninolytic fungus Ceriporiopsis subvermispora during growth on aspen wood reveal this organism’s strategy for degrading lignocellulose.” Applied Environmental Microbiology Vol.80(7), pp.2062-2070, 2014.

9

Hori, C., Gaskel, J., Igarashi, K., Samejima, M., Hibbett, D., Henrissat, B., Cullen, D.: “Genome-wide analysis of polysaccharides degrading enzymes in eleven white- and brown-rot Polyporales provides insight into mechanisms of wood decay.” Mycologia Vol.105(6), pp.1412-1427, 2013.

8

Floudas, D., Binder, M., Riley, R., Barry, K., Blanchette, R.A., Henrissat, B., Martínez, A.T., Otillar, R., Spatafora, J.W., Yadav, J.S., Aerts, A., Benoit, I., Boyd, A., Carlson, A., Copeland, A., Coutinho, P.M,, de Vries, R.P., Ferreira, P., Findley, K., Foster, B., Gaskell, J., Glotzer, D., Górecki, P., Heitman, J., Hesse, C., Hori, C., Igarashi, K., Jurgens, JA., Kallen, N., Kersten, P., Kohler, A., Kües, U., Kumar, T.K., Kuo, A., LaButti, K., Larrondo, L.F., Lindquist, E., Ling, A., Lombard, V., Lucas, S., Lundell, T., Martin, R., McLaughlin, D.J., Morgenstern, I., Morin, E., Murat, C., Nagy, L.G., Nolan, M., Ohm, R.A., Patyshakuliyeva, A., Rokas, A., Ruiz-Dueñas, F.J., Sabat, G., Salamov, A., Samejima, M., Schmutz, J., Slot, J.C., St John, F., Stenlid, J., Sun, H., Sun, S., Syed, K., Tsang, A., Wiebenga, A., Young, D., Pisabarro, A., Eastwood, D.C., Martin, F., Cullen, D., Grigoriev, I.V., Hibbett, D.S.: “The Paleozoic origin of enzymatic mechanisms for decay of lignin reconstructed using 31 fungal genomes.” Science Vol.236(6089), pp.1715-1719, 2012.

7

Hori, C., Suzuki, H., Igarashi, K., Samejima, M.: “Transcriptional response of cellobiose dehydrogenase gene to cello- and xylooligosaccharides in the basidiomycete Phanerochaete chrysosporium.” Applied Environmental Microbiology Vol.78(10), pp.3770-3773, 2012.

6

Higashijima, K., Hori, C., Igarashi, K., Enomae, T., Isogai, A.: “First aid for flood-damaged paper using saltwater: The inhibiting effect of saltwater on mold growth.” Studies in conservation Vol.57(3), pp.164-171, 2012.

5

Suzuki, H., MacDonald, J., Syed, K., Salamov, A., Hori, C., Aerts, A., Henrissat, B., Wiebenga, A., VanKuyk, P.A., Barry, K., Lindquist, E., LaButti, K., Lapidus, A., Lucas, S., Coutinho, P., Gong, Y., Samejima, M., Mahadevan, R., Abou-Zaid, M., de Vries, R.P., Igarashi, K., Yadav, J.S., Grigoriev, I.V., Master, E.R.: “Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize.” BMC Genomics Vol.13, pp.444-460,  2012.

4

Fernandez-Fueyo, E., Ruiz-Dueñas, F.J., Ferreira, P., Floudas, D., Hibbett, D.S., Canessa, P., Larrondo, L.F., James, T.Y., Seelenfreund, D., Lobos, S., Polanco, R., Tello, M., Honda, Y., Watanabe, T., Watanabe, T., San, R.J., Kubicek, C.P., Schmoll, M., Gaskell, J., Hammel, K.E., St John, F.J., Vanden Wymelenberg, A., Sabat, G., Splinter Bondurant, S., Syed, K., Yadav, J.S., Doddapaneni, H., Subramanian, V., Lavín, J.L., Oguiza, J.A., Perez, G., Pisabarro, A.G., Ramirez, L., Santoyo, F., Master, E., Coutinho, P.M., Henrissat, B., Lombard, V., Magnuson, J.K., Kües, U., Hori, C., Igarashi, K., Samejima, M., Held, B.W., Barry, K.W., Labutti, K.M., Lapidus, A., Lindquist, E.A., Lucas, S.M., Riley, R., Salamov, A.A., Hoffmeister, D., Schwenk, D., Hadar, Y., Yarden, O., de Vries, R.P., Wiebenga, A., Stenlid, J., Eastwood, D., Grigoriev, I.V., Berka, R.M., Blanchette, R.A., Kersten, P., Martinez, A.T., Vicuna, R., Cullen, D.:  “Comparative genomics of Ceriporiopisis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. “ Proceedings of National Academy of Science the United States of America Vol.109(14), pp.5458-5463, 2012.

3

Hori, C., Igarashi, K., Katayama, A., Samejima, M.: “Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose.” FEMS Microbiology Letter Vol.321(1), pp.14-23, 2011.

2

石黒真希、堀 千明、片山 映、五十嵐圭日子、高畠幸司、金子 哲、鮫島正浩: “エノキタケのトランスクリプトーム配列情報を用いた全分泌タンパク質の解析”木材学会誌 Vol.56, pp.388-396, 2010.

1

Igarashi, K., Ishida, T., Hori, C., Samejima, M.: “Characterization of endoglucanase belonging to new subfamily of glycoside hydrolase family 45 from the basidiomycete Phanerochaete chrysosporium.” Appllied Environmental Microbiology Vol.74(18), pp.5628-34, 2008.

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