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大井 俊彦

148

Kenji TAKISAWA, Toshihiko OOI, Ken’ichiro MATSUMOTO, Ryosuke KADOYA, Seiichi TAGUCHI: “Xylose-based hydrolysate from eucalyptus extract as feedstock for poly(lactate-co-3-hydroxybutyrate) production in engineered Escherichia coli“, Process Biochem., Vol. 54, pp. 102-105, 03.05 Link

147

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:“Genome-wide screening of transcription factor deletion targets in Escherichia coli for enhanced production of lactate-based polyesters”, J. Biosci. Bioeng., Vol. 123, pp.535-539, 2017.5.  PubMed

141

Jian SUN, Camila UTSUNOMIA, Shohei SASAKI, Ken’ichiro MATSUMOTO, Toshihiko YAMADA, Toshihiko OOI, Seiichi TAGUCHI:“Microbial production of poly(lactate-co-3-hydroxybutyrate) from hybrid Miscanthus-derived sugars”, Biosci. Biotechnol. Biochem., Vol. 80, pp. 818-820, 2016.04.  PumMed

140

Jian SUN, Ken’ichiro MATSUMOTO, Yuta TABATA, Ryosuke KADOYA, Toshihiko OOI, Hideki ABE, Seiichi TAGUCHI: “Molecular weight-dependent degradation of D-lactate-containing polyesters by polyhydroxyalkanoate depolymerases from Variovorax sp. C34 and Alcaligenes faecalis T1″, Appl. Microbiol. Biotechnol., Vol. 99, pp. 9555-9563, 2015.11.  PumMed

138

Ryosuke KADOYA, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “MtgA Deletion-Triggered Cell Enlargement of Escherichia coli for Enhanced Intracellular Polyester Accumulation”, PLos ONE, Vol.10, e0125163, 2015.6. PubMed

134

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, Vol.4, 83, 2014.11. Pubmed

71

Matsumoto K, Yamazaki K, Kawakami S, Miyoshi D, Ooi T, Hashimoto S, Taguchi S: In vivo target exploration of apidaecin based on Acquired Resistance induced by Gene Overexpression (ARGO assay)., Scientific Reports, 7(1):12136 (2017). PubMed

Doi: 10.1038/s41598-017-12039-6.

69

Ishii D, Takisawa K, Matsumoto K, Ooi T, Hikima T, Takata M, Taguchi S, Iwata T:

“Effect of monomeric composition on the thermal, mechanical and crystalline properties of poly[(R)-lactate-co-(R)-3-hydroxybutyrate]“

Polymer, 122:169-173 (2017). Link

Doi:10.1016/j.polymer.2017.06.039

35

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press. Link

34

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

33

Jian YU, Daiki OGATA, ZuoQi GAI, Seiichi TAGUCHI, Isao TANAKA, Toshihiko OOI, Min YAO: “Structure of AzrA, AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism”, Acta Crystallographica Section D., Vol. 70, pp.553-564, 2014.02. Pubmed

32

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”,
Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

31

Ken’ichiro MATSUMOTO, Takehiro OKEI, Inori HONMA, Toshihiko OOI, Hirobumi AOKI, Seiichi TAGUCHI: “Efficient (R)-3-hydroxybutyrate production using acetyl-CoA regenerating pathway catalyzed by coenzyme A transferase”, Appl. Microbiol. Biotechnol., Appl. Microbiol. Biotechnol.,Vol.97(1),pp.205-210,2013.01. Pubmed

30

Toshihiko OOI , Daiki OGATA, Ken’ichiro MATSUMOTO, Gen NAKAMURA, Jian YU, Yao MIN, Masaya KITAMURA, Seiichi TAGUCHI, “Flavin-binding of azoreductase: Direct evidences for dual-binding property of apo-azoreductase with FMN and FAD”, J. Mol. Cat. B, Vol. 74(3-4), pp.204-208 2012.2. Link

29

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA and Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp.70-72 2012.01. Pubmed

28

Daiki OGATA, Toshihiko OOI, Takaaki FUJIWARA, Seiichi TAGUCHI, Isao TANAKA, Min YAO. : “Crystallization and preliminary X-ray studies of azoreductases from Bacillus sp.B29″ , Acta Crystallographica section F, Vol. 66(5), pp. 503-505, 2010.05. Pubmed

27

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04. PubMed

26

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., (2010). PubMed

25

Toshihiko OOI, Hirokazu SATO, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “A unique post-translational processing of an exo-β-1,3-glucanase of Penicillium sp. KH10 expressed in Aspergillus oryzae“. Protein Expression and Purification. 2009., Vol. 67(2), pp.126-131, 2009.08.PubMed

24

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

24

Anna OCHI, Ken’ichiro MATSUMOTO, Takashi OOBA, Kohei SAKAI , Takeharu TSUGE, and Seiichi TAGUCHI:
“Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”, Appl. Microbiol. Biotechnol., Vol. 97, pp. 3441-3447, 2012.08.  Pubmed

23

Toshihiko OOI, Takeshi SHIBATA, Ken’ichiro MATSUMOTO, Sinichi KINOSHITA, Seiichi TAGUCHI: “Comparative enzymatic analysis of azoreductases from Bacillus sp. B29″, Biosci. Biotechnol. Biochem., Vol. 73(5), pp.1209-1211, 2009.05.PubMed

22

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

21

Toshihiko OOI, Takeshi SHIBATA, Reiko SATO, Hiroaki OHNO, Sinichi KINOSHITA, Tran Linh Thnoc, Seiichi TAGUCHI: “An azoreductase, aerobic NADH-dependent flavoprotein discovered from Bacillus sp.: functional expression and enzymatic characterization”, Appl. Microbiol. Biotechnol., Vol. 75(2) , pp. 377-386, 2007.05PubMed

20

Sung-Jin JO, Michihisa MAEDA, Toshihiko OOI, Seiichi TAGUCHI: ” Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum” J. Biosci. Bioeng., Vol. 102 , pp. 233-236, 2006.09PubMed

19

Kazuki OKUNO, Masayuki YABUTA, Kazuhiro OHSUYE, Toshihiko OOI, and Shinichi KINOSHITA:
“An Analysis of target perferences of Escherichia coli Outermembrane endoprotease OmpT for use in therapeutic peptide production: efficient cleavage of substrates with basic amino acids at the P4 and P6 positions”, Biotechnol. Appl. Biochem. Vol.36, pp. 77-84, 2002PubMed

18

Kazuki OKUNO, Masayuki YABUTA, Kouji KAWANISHI, Kazuhiro OHSUYE, Toshihiko OOI, and Shinichi KINOSHITA: “Substrate Specifity at the P1′ Site of Escherichia coli OmpT under Denaturing Conditions”,
Biosci. Biotechnol. Biochem., Vol.66 (11), pp. 127-134, 2002PubMed

17

Daisuke HISHINUMA, Akemi MAKABE, Hideo TSURUGA, Toshihiko OOI, and Shinichi KINOSHITA:
“Fungal Decolorization of Microbially Treated Night Soils”,
Japanese Journal of Water Treatment Biology, Vol.37 (3), pp. 123-128, 2001.Journal

16

Yasumitsu MIYAMOTO, Toshihiko OOI, and Shinichi KINOSHITA:
“Production of lactobionic acid from whey by Pseudomonas sp. LS13-1”,

Biotechnology Letters, Vol.22, pp. 427-430, 2000
15

Jintana KRAIWATTANAPONG, Toshihiko OOI, Shinichi KINOSHITA, SUGIMURA,Tomoo SAWABE and Yoshio EZURA:“Hydrophobic cluster analysis and classification of sixteen bacterial alginate lyases”, World Journal of Microbiology & Biotechnology, Vol.16, pp. 219-224, 2000

14

Akira OHNISHI, Toshihiko OOI, Shinichi KINOSHITA, Hirotaka TOMATSURI, Kazuyuki UMEDA, Shunsaku UEDA, Yasuo HATA and Motoo ARAI :“Analysis of a catalytic acidic pair in the active center of cellulase from Aspergillus aculeatus”, Bioscience, Biotechnology and Biochemistry, Vol. 63, pp. 2157-2162, 1999

13

Toshihiko OOI, Keiko MOROTOMI, Shinichi KINOSHITA, Junko HONDA, Shunsaku UEDA and Motoo ARAI:“Analysis of 5′-upstream non-coding region of FI-carboxymethyl cellulose gene from Aspergillus aculeatus”, World Journal of Microbiology & Biotechnology Letters Vol. 21, pp. 735-739, 1999

12

Chartchai KHANONGNUCH, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and nucleotide sequence of β-mannanase and cellulase genes from Bacillus sp. 5H”, World Journal of Microbiology & Biotechnology Letters Vol. 15, pp. 221-228, 1999

11

Jintana KRAIWATTANAPONG, Keiko MOTOMURA, Toshihiko OOI, Shinichi KINOSHITA:
“Characterization of alginate lyase (ALYII) from Pseudomonas sp. OS-ALG-9 expressed in recombinant Escherichia coli”, World Journal of microbiology & Biotechnology, Vol. 15, pp. 105-109, 1999

10

Jintana KRAIWATTANAPONG, Hideo TSURUGA, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and sequencing of a Deleya marina gene encoding for alginate lyase”, World Journal of Microbiology & Biotechnology Letters, Vol. 21, pp. 169-174, 1999

9

Chartchai KHANONGNUCH, Saisamorn LUMYONG, Toshihiko OOI, Shinichi KINOSHITA:
“A non-cellulase producing strain of Bacillus subtilis and its potential use in pulp biobleaching”, World Journal of Microbiology & Biotechnology Letters, Vol. 21, pp. 61-63, 1999

8

Chartchai KHANONGNUCH, Kouhei ASADA, Hideo TSURUGA, Toshihiko OOI, Shinichi KINOSHITA, Saisamorn Lumyong:“ β-Mannanase and xylanase of Bacillus subtilis 5H active for bleaching of crude pulp ”, Journal of Fermentation and Bioengineering, Vol. 86, pp. 461-466, 1998

7

Kunichika NAKAMIYA, Gyousei SAKASHITA, Toshihiko OOI, Shinichi KINOSHITA:
“Enzymatic degradation of polystyrene by hydroquinone peroxydase of Azotobacter beijerinckii HM121 ”, Journal of Fermentation and Bioengineering, Vol. 84, pp. 480-482, 1997

6

Jintana KRAIWATTANPONG, Toshihiko OOI, Shinichi KINOSHITA:
“Cloning and sequence analysis of the gene (alyII) coding for alginate lyase of Pseudomonas sp. OS-ALG-9”, World Journal of Microbiology & Bioscience, Biotechnology and Biochemistry, Vol. 61, pp.1853-1857 1997

5

Kunichika NAKAMIYA, Toshihiko OOI, Shinichi KINOSHITA :
“Degradation of synthetic water-soluble polymers by hydroquinone peroxydase”, Journal of Fermentation and Bioengineering, 1997

4

Kunichika NAKAMIYA, Toshihiko OOI, Shinichi KINOSHITA:
“Non-heme hydroquinone peroxidase from Azotobacter beijerinckii HM121”, World Journal of Microbiology & Journal of Fermentation and Bioengineering, Vol. 84, pp. 14-21, 1997

3

Shinichi MATSUDA, Yuusuke KAWAKAMI, Hiroyuki TAKEDA, Toshihiko OOI, Shinichi KINOSHITA:
“Purification and properties of mutanase from Bacillus circulans”, World Journal of Microbiology & Journal of Fermentation and Bioengineering, Vol. 83, pp. 593-595, 1997

2

Takashi KAWAGUCHI, Tatsuji ENOKI, Shinji TSURUMAKI, Jun-ichi SUMITANI, Mistuhiru UEDA, Toshihiko OOI, Motoo ARAI :“Cloning and sequencing of the cDNA encoding -glucosidase 1 from Aspergillus aculeatus.”, World Journal of Microbiology & Gene, Vol. 173, pp. 287-288, 1996

1

Yoshiaki HATAKEYAMA, Hiroyuki TAKEDA, Toshihiko OOI, Shinichi KINOSHITA:
“Kinetic parameters of -fructofuranosidase from Scopulariopsis brevicaulis ”, Journal of Fermentation and Bioengineering, Vol. 81, pp. 518-523, 1996

松本 謙一郎

71

Matsumoto K, Yamazaki K, Kawakami S, Miyoshi D, Ooi T, Hashimoto S, Taguchi S: In vivo target exploration of apidaecin based on Acquired Resistance induced by Gene Overexpression (ARGO assay)., Scientific Reports, 7(1):12136 (2017). PubMed

Doi: 10.1038/s41598-017-12039-6.

70

Utsunomia C, Hori C, Matsumoto K, Taguchi S:

Investigation of the Escherichia coli membrane transporters involved in the secretion of d-lactate-based oligomers by loss-of-function screening., Journal of Bioscience and Bioengineering, in press. PubMed

Doi: 10.1016/j.jbiosc.2017.06.018

69

Ishii D, Takisawa K, Matsumoto K, Ooi T, Hikima T, Takata M, Taguchi S, Iwata T:

“Effect of monomeric composition on the thermal, mechanical and crystalline properties of poly[(R)-lactate-co-(R)-3-hydroxybutyrate]“

Polymer, 122:169-173 (2017). Link

Doi:10.1016/j.polymer.2017.06.039

68

Utsunomia C, Matsumoto K, Date S, Hori C, Taguchi S:

“Microbial secretion of lactate-enriched oligomers for efficient conversion into lactide: A biological shortcut to polylactide”

Journal of Bioscience and Bioengineering, 124:204-208 (2017). PubMed

DOI: 10.1016/j.jbiosc.2017.03.002

67

Salamanca-Cardona L, Scheel RA, Mizuno K, Bergey NS, Stipanovic AJ, Matsumoto K, Taguchi S, Nomura CT:

“Effect of acetate as a co-feedstock on the production of poly(lactate-co-3-hydroxyalkanoate) by pflA-deficient Escherichia coli RSC10″

Journal of Bioscience and Bioengineering, 2017, 123(5): 547-554.

DOI: 10.1016/j.jbiosc.2016.12.019  PubMed

66

Utsunomia C, Matsumoto K, Taguchi S:

“Microbial secretion of D-lactate-based oligomers”

ACS Sustainable Chemistry & Engineering, 2017, 5(3): 2360-2367.

DOI: 10.1021/acssuschemeng.6b02679  Link

65

Takisawa K, Ooi T, Matsumoto K, Kadoya R, Taguchi S:

“Xylose-based hydrolysate from eucalyptus extract as feedstock for poly(lactate-co-3-hydroxybutyrate) production in engineered Escherichia coli

Process Biochemistry, 2017, 54: 102-105.

DOI: 10.1016/j.procbio.2016.12.019  Link 

64

Kadoya R, Kodama Y, Matsumoto K, Ooi T, Taguchi S:

“Genome-wide screening of transcription factor deletion targets in Escherichia coli for enhanced production of lactate-based polyesters”

Journal of Bioscience and Bioengineering, 2017, 123(5): 535-539.

DOI: 10.1016/j.jbiosc.2016.12.018  PubMed 

63

Yoshizumi T, Yamada M, Higuchi-Takeuchi M, Matsumoto K, Taguchi S, Matsui M, Numata K:

“Sucrose supplementation suppressed the growth inhibition in polyhydroxyalkanoate-producing plants”

Plant Biotechnology, 2017, 34(1): 39-43.

DOI: 10.5511/plantbiotechnology.16.1121a  Link

62

Ken’ichiro Matsumoto, Tetsufumi Shiba, Yukikazu Hiraide, and Seiichi Taguchi, “Incorporation of glycolate units promotes hydrolytic degradation in flexible poly(glycolate-co-3-hydroxybutyrate) synthesized by engineered Escherichia coli”, ACS Biomaterials Science & Engineering, in press.

61

Kabe T, Matsumoto K, Terai S, Hikima T, Takata M, Miyake M, Taguchi S, Iwata T:

“Co-crystallization phenomena in biosynthesized isotactic poly[(R)-lactate-co-(R)-2-hydroxybutyrate]s with various lactate unit ratios”

Polymer Degradation and Stability, 2016, 132: 137-144.

DOI: 10.1016/j.polymdegradstab.2016.03.005  Link

60

Salamanca-Cardona L, Scheel RA, Bergey NS, Stipanovic AJ, Matsumoto K, Taguchi S, Nomura CT:

“Consolidated bioprocessing of poly(lactate-co-3-hydroxybutyrate) from xylan as a sole feedstock by genetically-engineered Escherichia coli

Journal of Bioscience and Bioengineering, 2016, 122(4): 406-414.

DOI: 10.1016/j.jbiosc.2016.03.009  PubMed

59

Sun J, Utsunomia C, Sasaki S, Matsumoto K, Yamada T, Ooi T, Taguchi S:

“Microbial production of poly(lactate-co-3-hydroxybutyrate) from hybrid Miscanthus-derived sugars”

Bioscience, Biotechnology, and Biochemistry, 2016, 80(4): 818-820.

DOI: 10.1080/09168451.2015.1116933  PumMed

58

Sun J, Matsumoto K, Tabata Y, Kadoya R, Ooi T, Abe H, Taguchi S:

“Molecular weight-dependent degradation of D-lactate-containing polyesters by polyhydroxyalkanoate depolymerases from Variovorax sp. C34 and Alcaligenes faecalis T1″

Applied Microbiology and Biotechnology, 2015, 99(22): 9555-9563.

DOI: 10.1007/s00253-015-6756-1  PumMed

57

Kadoya R, Kodama Y, Matsumoto K, Taguchi S:

“Indirect positive effects of a sigma factor RpoN deletion on the lactate-based polymer production in Escherichia coli

Bioengineered, 2015, 6(5): 307-311.

DOI: 10.1080/21655979.2015.1069449  PubMed

56

Kadoya R, Matsumoto K, Ooi T, Taguchi S:

“MtgA deletion-triggered cell enlargement of Escherichia coli for enhanced intracellular polyester accumulation”

PLos ONE, 2015, 10(6): e0125163.

DOI: 10.1371/journal.pone.0125163  PubMed

55

 Yokoo T, Matsumoto K, Ooba T, Morimoto K, Taguchi S:

“Enhanced poly(3-hydroxybutyrate) production in transgenic tobacco BY-2 cells using engineered acetoacetyl-CoA reductase”

Bioscience, Biotechnology, and Biochemistry, 2015, 79(6): 986-988.

DOI: 10.1080/09168451.2014.1002448  Pubmed

54

Matsumoto K, Tobitani K, Aoki S, Song Y, Ooi T, Taguchi S:

“Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”

AMB Express, 2014, 4: 83.

DOI: 10.1186/s13568-014-0083-2  Pubmed

53

Kadoya R, Kodama Y, Matsumoto K, Taguchi S:

“Enhanced cellular content and lactate fraction of the P(lactate-co-3-hydroxybutyrate) produced in recombinant Escherichia coli by the deletion of sigma factor RpoN”

Journal of Bioscience and Bioengineering, 2015, 119(4): 427-429.

DOI: 10.1016/j.jbiosc.2014.09.001  Link

52

Sun J, Matsumoto K, Nduko JM, Ooi T, Taguchi S:

“Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”

Polymer Degradation and Stability, 2014, 110: 44-49.

DOI: 10.1016/j.polymdegradstab.2014.08.013  Link

51

Salamanca-Cardona L, Ryan, Scheel RA, Lundgren BR, Stipanovic AJ, Matsumoto K, Taguchi S, Nomura CT:

“Deletion of the pflA gene in Escherichia coli LS5218 and its effects on the production of polyhydroxyalkanoates using beechwood xylan as a feedstock”

Bioengineered, 2014, 5(5): 284-287.

DOI: 10.4161/bioe.29595  Link

50

Tappel R, Pan W, Bergey N, Wang Q, Patterson I, Ozumba O, Matsumoto K, Taguchi S, Nomura C:

“Engineering Escherichia coli for improved production of short-chain-length-co-medium-chain-length poly[(R)-3-hydroxyalkanoate] (SCL-co-MCL PHA) copolymers from renewable non-fatty acid feedstocks”

ACS Sustainable Chemistry & Engineering, 2014, 2(7): 1879-1887.

DOI: 10.1021/sc500217p  Link

49

Nduko JM, Matsumoto K, Ooi T, Taguchi S:

“Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”

Applied Microbiology and Biotechnology, 2014, 98(6): 2453-60.

DOI: 10.1007/s00253-013-5401-0  Pubmed

48

Matsumoto K, Tanaka Y, Watanabe T, Motohashi R, Ikeda K, Tobitani K, Yao M, Tanaka I, Taguchi S:

“Directed evolution and structural analysis of NADPH-dependent acetoacetyl-CoA reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics”

Applied and Environmental Microbiology, 2013, 79(19): 6134-6139.

DOI: 10.1128/AEM.01768-13  Pubmed

47

Matsumoto K, Terai S, Ishiyama A, Sun J, Kabe T, Song Y, Nduko J, Iwata T, Taguchi S:

“One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”

Biomacromolecules, 2013, 14(6): 1913-1918.

DOI: 10.1021/bm400278j  Link

46

Nduko JM, Matsumoto K, Ooi T, Taguchi S:

“Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”

Metabolic Engineering, 2013, 15:159-166.

DOI: 10.1016/j.ymben.2012.11.007  Pubmed

45

Song Y, Matsumoto K, Tanaka T, Kondo A, Taguchi S:

“Single-step production of polyhydroxybutyrate from starch by using a-amylase cell-surface displaying system of Corynebacterium glutamicum

Journal of Bioscience and Bioengineering, 2012, 115(1): 12-14.

DOI: 10.1016/j.jbiosc.2012.08.004  Pubmed

44

Ochi A, Matsumoto K, Ooba T, Sakai K, Tsuge T, Taguchi S:

“Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”

Applied Microbiology and Biotechnology, 2013, 97(8): 3441-3447.

DOI: 10.1007/s00253-012-4231-9  Pubmed

43

Matsumoto K, Okei T, Honma I, Ooi T, Aoki H, Taguchi S:

“Efficient (R)-3-hydroxybutyrate production using acetyl-CoA regenerating pathway catalyzed by coenzyme A transferase”

Applied Microbiology and Biotechnology, 2012, 97(1): 205-210.

DOI: 10.1007/s00253-012-4104-2  Pubmed

42

Song Y, Matsumoto K, Yamada M, Gohda A, Brigham CJ, Sinskey AJ, Taguchi S:

“Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”

Applied Microbiology and Biotechnology, 93(5): 2011, 1917-1925.

 DOI: 10.1007/s00253-011-3718-0  Pubmed

41

Ooi T, Ogata D, Matsumoto K, Nakamura G, Yu J, Yao M, Kitamura M, Taguchi S:

“Flavin-binding of azoreductase: Direct evidences for dual-binding property of apo-azoreductase with FMN and FAD”

Journal of Molecular Catalysis B: Enzymatic, 2012, 74(3-4): 204-208.

DOI: 10.1016/j.molcatb.2011.10.006  Link

40

Nduko JM, Suzuki W, Matsumoto K, Kobayashi H, Ooi T, Fukuoka A, Taguchi S:

“Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural”

Journal of Bioscience and Bioengineering, 2012, 113(1): 70-72 (2012).

DOI: 10.1016/j.jbiosc.2011.08.021  Pubmed

39

Matsumoto K, Ishiyama A, Sakai K, Shiba T, Taguchi S:

“Biosynthesis of glycolate-based polyesters containing medium-chain-length 3-hydroxyalkanoates in recombinant Escherichia coli expressing engineered polyhydroxyalkanoate synthase”

Journal of Biotechnology, 2011, 156(3): 214-217 (2011).

DOI: 10.1016/j.jbiotec.2011.07.040  Pubmed

38

Han X, Satoh Y, Satoh T, Matsumoto K, Kakuchi T, Taguchi S, Dairi T, Munekata M, Tajima K:

“Chemo-enzymatic synthesis of polyhydroxyalkanoate (PHA) incorporating 2-hydroxybutyrate by wild-type class I PHA synthase from Ralstonia eutropha

Applied Microbiology and Biotechnology, 2011, 92(3): 509-217 (2011).

DOI: 10.1007/s00253-011-3362-8  Pubmed

37

Yamada M, Matsumoto K, Uramoto S, Motohashi R, Abe H, Taguchi S:

“Lactate fraction dependent machanical properties of semitransparent poly(lactate-co-3-hydroxybutyrate)s produced by control of lactyl-CoA monomer fluxes in recombinant Escherichia coli

Journal of Biotechnology, 2011, 154:255-260.

DOI: 10.1016/j.jbiotec.2011.05.011  Pubmed

36

Matsumoto K, Morimoto K, Gohda A, Shimada H, Taguchi S:

“Improved polyhydroxybutyrate (PHB) production in transgenic tobacco by enhancing translation efficiency of bacterial PHB biosynthetic genes”

Journal of Bioscience and Bioengineering, 2011, 111(4): 485-488.

DOI: 10.1016/j.jbiosc.2010.11.020  Pubmed

35

Matsumoto K, Kitagawa K, Jo SJ, Song Y, Taguchi S:

“Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”

Journal of Biotechnology, 2011, 152(4): 144-146.

DOI: 10.1016/j.jbiotec.2010.07.031  Pubmed

34

Matsumoto K, Yamada M, Leong CR, Jo SJ, Kuzuyama T, Taguchi S:

“A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”

Bioscience, Biotechnology, and Biochemistry, 2011, 75(2): 364-366.

DOI: 10.1271/bbb.100682  Pubmed

33

Shozui F, Matsumoto K, Motohashi R, Sun J, Satoh T, Kakuchi T, Taguchi S:

“Biosynthesis of lactate(LA)-based polyester with a 96 mol% LA fraction and its application to stereocomplex formation”

Polymer Degradation and Stability, 96(4): 499-504 (2011). Journal

DOI: 10.1016/j.polymdegradstab.2011.01.007  Journal

32

Matsumoto K, Kobayashi H, Ikeda K, Komanoya T, Fukuoka A, Taguchi S:

“Chemo-microbial conversion of cellulose into polyhydroxybutyrate through ruthenium-catalyzed hydrolysis of cellulose into glucose”

Bioresource Technol., 2011, 102(3): 3564-3567.

DOI: 10.1016/j.biortech.2010.09.098   Pubmed

31

She KC, Kusano H, Koizumi K, Yamakawa H, Hakata M, Imamura T, Fukuda M, Naito N, Tsurumaki Y, Yaeshima M, Tsuge T, Matsumoto K, Kudoh M, Itoh E, Kikuchi S, Kishimoto N, Yazaki J, Ando T, Yano M, Aoyama T, Sasaki T, Satoh H, Shimada H:

“A novel factor FLOURY ENDOSPERM 2 is involved in regulation of rice grain size and starch quality”

Plant Cell, 2010, 22(10): 3280-3294.

DOI: 10.1105/tpc.109.070821  Pubmed

30

Sun J, Shozui F, Yamada M, Matsumoto K, Taguchi S:

“Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida

Bioscience, Biotechnology, and Biochemistry, 2010, 74(8): 1716-1718.

DOI: 10.1271/bbb.100242  Pubmed

29

Shozui F, Sun J, Song Y, Yamada M, Sakai K, Matsumoto K, Takase K, Taguchi S:

“A new beneficial mutation in Pseudomonas sp. 61-3 polyhydroxyalkanoate (PHA) synthase for enhanced cellular content of 3-hydroxybutyrate-based PHA explored using its enzyme homolog as a mutation template”

Bioscience, Biotechnology, and Biochemistry, 2010, 74(8): 1710-1712.

DOI: 10.1271/bbb.100224  Pubmed

28

Shozui F, Matsumoto K, Motohashi R, Yamada M, Taguchi S:

“Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″

Polymer Degradation and Stability, 2010, 95(8): 340-1344.

DOI: 10.1016/j.polymdegradstab.2010.01.029  Journal

27

Wang Q, Mueller A, Leong CR, Matsumoto K, Taguchi S, Nomura CT:

“Quick and efficient method for genetic transformation of biopolymer producing bacteria”

Journal of Chemical Technology and Biotechnology, 2010, 85(6): 775-778.

DOI: 10.1002/jctb.2284  Journal

26

Matsumoto K, Orikasa Y, Ichinohe K, Hashimoto S, Ooi T, Taguchi S:

“Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins”

Biochemical and Biophysical Research Communications, 2010, 395(1): 7-10.

DOI: 10.1016/j.bbrc.2010.03.088  PubMed

25

Matsumoto K, Mukai Y, Ogata D, Shozui F, Nduko JM, Taguchi S, Ooi T:

“Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus

Applied Microbiology and Biotechnology, 2010, 86(5): 1431-1438.

DOI: 10.1007/s00253-009-2351-7  PubMed

24

Yamada M, Matsumoto K, Shimizu K, Uramoto S, Nakai T, Shozui F, Taguchi S:

“Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition”

Biomacromolecules, 2010, 11(3): 815-819 (2010).

DOI: 10.1021/bm901437z   PubMed

23

Shozui F, Matsumoto K, Nakai T, Yamada M, Taguchi S:

Biosynthesis of novel terpolymers “Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”

Applied Microbiology and Biotechnology, 2010, 85(4): 949-954.

DOI: 10.1007/s00253-009-2100-y  PubMed

22

Shozui F, Matsumoto K, Sasaki T, Taguchi S:

“Engineering of polyhydroxyalkanoate synthase by Ser477X/Gln481X saturation mutagenesis for efficient production of 3-hydroxybutyrate-based copolyesters”

Applied Microbiology and Biotechnology, 2009, 84(6): 1117-1124.

DOI: 10.1007/s00253-009-2052-2  PubMed

21

Ooi T, Sato H, Matsumoto K, Taguchi S:

“A unique post-translational processing of an exo-β-1,3-glucanase of Penicillium sp. KH10 expressed in Aspergillus oryzae

Protein Expression and Purification, 2009, 67(2): 126-131.

DOI: 10.1016/j.pep.2009.05.016  PubMed

20

Orikasa Y, Ichinohe K, Saito J, Hashimoto S, Matsumoto K, Ooi T, Taguchi S:

“Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus

Bioscience, Biotechnology, and Biochemistry, 2009, 73(7): 1683-1684.

DOI: 10.1271/bbb.90183  PubMed

19

Ooi T, Shibata T, Matsumoto K, Kinoshita S, Taguchi S:

“Comparative enzymatic analysis of azoreductases from Bacillus sp. B29″

Bioscience, Biotechnology, and Biochemistry, 2009, 73(5): 1209-1211.

DOI: 10.1271/bbb.80872  PubMed

18

Matsumoto K, Takase K, Yamamoto Y, Doi Y, Taguchi S:

“Chimeric enzyme composed of polyhydroxyalkanoate (PHA) synthases from Ralstonia eutropha and Aeromonas caviae enhances production of PHAs in recombinant Escherichia coli

Biomacromolecules, 2009, 10(4): 682-685.

DOI: 10.1021/bm801386j  PubMed

17

Yamada M, Matsumoto K, Nakai K, Taguchi S:

“Microbial production of lactate-enriched poly[(R)-lactate-co-(R)-3-hydroxybutyrate] with novel thermal properties”

Biomacromolecules, 2009, 10(4): 677-681.

DOI: 10.1021/bm8013846  PubMed

16

Matsumoto K, Murata T, Nagao R, Nomura C, Arai S, Takasa K, Nakashita H, Taguchi S, Shimada H:

“Production of short-chain-length/medium-chain-length polyhydroxyalkanoate (PHA) copolymer in the plastid of Arabidopsis thaliana using the evolved 3-ketoacyl-acyl carrier protein synthase III”

Biomacromolecules, 2009, 10(4): 686-690.

DOI: 10.1021/bm8013878  PubMed

15

Jo SJ, Leong CR, Matsumoto K, Taguchi S:

“Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration”

Journal of Bioscience and Bioengineering, 2009, 107(4): 409-411 (2009).

DOI: 10.1016/j.jbiosc.2008.12.003  PubMed

14

Matsumoto K, Shozui F, Satoh Y, Tajima K, Munekata M, Taguchi S:

“Kinetic analysis of engineered polyhydroxyalkanoates synthases with broad substrate specificity”

Polymer Journal, 2009, 41(3): 237-240.

DOI:10.1295/polymj.PJ2008253  Journal

13

Taguchi S, Yamada M, Matsumoto K, Tajima K, Sato Y, Munekata M, Ohono K, Kohda K, Shimamura T, Kambe H, Obata S:

“A microbial factory for lactate-based polyesters using a lactate-polymerizing enzyme”

Proceedings of the National Academy of Sciences of the United States of America, 2008, 105(45): 17323-17327.

DOI: 10.1073/pnas.0805653105  PubMed

12

Nomura CT, Tanaka T, EguenTE, Appah AS, Matsumoto K, Taguchi S, Ortiz CL, Doi Y:  “FabG mediates polyhydroxyalkanoate production from both related and nonrelated carbon sources in recombinant Escherichia coli LS5218″

Biotechnology Progress, 2008, 24(2): 342-351.

DOI: 10.1021/bp070303y  PubMed

11

Jo SJ, Matsumoto K, Leong CR, Ooi T, Taguchi S:

“Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”

Journal of Bioscience and Bioengineering, 2007, 104(6): 457-463.

DOI: 10.1263/jbb.104.457  PubMed

10

Matsumoto K, Arai Y, Nagao R, Murata T, Takase K, Nakashita H, Taguchi S, Shimada H, Doi Y:

“Synthesis of short-chain-length/medium-chain length polyhydroxyalkanoate (PHA) copolymers in peroxisome of the transgenic Arabidopsis thaliana harboring the PHA synthase gene from Pseudomonas sp. 61-3″

Journal of Polymers and the Environment, 2006, 14(4): 369-374.

DOI: 10.1007/s10924-006-0035-2  Journal

9

Matsumoto K, Aoki E, Takase K, Doi Y, Taguchi S:

“In vivo and in vitro characterization of Ser477X mutations in polyhydroxyalkanoate (PHA) synthase 1 from Pseudomonas sp. 61-3: effects of beneficial mutations on enzymatic activity, substrate specificity, and molecular weight of PHA”

Biomacromolecules, 2006, 7(8): 2436-2442.

DOI: 10.1021/bm0602029  PubMed

8

Matsumoto K, Nagao R, Murta T, Arai Y, Kichise T, Nakashita H, Taguchi S, Shimada H, Doi Y:

“Enhancement of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production in the recombinant Arabidopsis thaliana by the in vitro evolved highly active mutants of polyhydroxyalkanoate (PHA) synthase from Aeromonas caviae”

Biomacromolecules, 2005, 6(4): 2126-2130.

DOI: 10.1021/bm050113g  PubMed

7

Matsumoto K, Takase K, Taguchi S, Doi Y:

“Synergistic effects of Glu130Asp substitution in the Type II polyhydroxyalkanoate (PHA) synthase: enhancement of PHA production and alteration of polymer molecular weight”

Biomacromolecules, 2005, 6(1): 99-104.

DOI: 10.1021/bm049650b  PubMed

6

Takase K, Matsumoto K, Taguchi S, Y. Doi Y:

“Alteration of substrate chain-length specificity of type Ⅱsynthase for polyhydroxyalkanoate biosynthesis by in vitro evolution: in vivo and in vitro enzyme assays”

Biomacromolecules, 2004, 5(2): 480-485.

DOI: 10.1021/bm034323+  PubMed

5

Taguchi S, Matsusaki H, Matsumoto K, Takase K, Taguchi K, Doi Y:

“Biosynthesis of biodegradable copolyesters from renewable carbon sources by recombinant bacteria”

Polymer International, 2002, 51(10): 899-906.

DOI: 10.1002/pi.878  Journal

4

Sudesh K, Gan Z, Matsumoto K, Doi Y:

“Direct observation of polyhydroxyalkanoate chains by atomic force microscopy”

Ultramicroscopy, 2002, 91(1-4): 157-164.

DOI: 10.1016/S0304-3991(02)00095-5  Journal

3

Matsumoto K, Matsusaki H, Taguchi K, Seki M, Doi Y:

“Isolation and characterization of polyhydroxyalkanoates inclusions and their associated proteins in Pseudomonas sp. 61-3″

Biomacromolecules, 2002, 3(4): 787-792.

DOI: 10.1021/bm025516k  PubMed

2

Matsumoto K, Nakae S, Taguchi K, Matsusaki H, Seki M, Doi Y:

“Biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxyalkanoates) copolymer from sugars by recombinant Ralstonia eutropha harboring the phaC1Ps and the phaGPs genes of Pseudomonas sp. 61-3″

Biomacromolecules, 2001, 2(3): 934-939.

DOI: 10.1021/bm0155367  Journal

1

Matsumoto K, Matsusaki H, Taguchi S, Seki M, Doi Y:

“Cloning and characterization of the Pseudomonas sp. 61-3 phaG gene involved in polyhydroxyalkanoate biosysnthesis”

Biomacromolecules, 2001, 2(1): 142-147.

DOI: 10.1021/bm005604+  PubMed

堀 千明

70

Utsunomia C, Hori C, Matsumoto K, Taguchi S:

Investigation of the Escherichia coli membrane transporters involved in the secretion of d-lactate-based oligomers by loss-of-function screening., Journal of Bioscience and Bioengineering, in press. PubMed

Doi: 10.1016/j.jbiosc.2017.06.018

15

Utsunomia, C., Matsumoto, K., Date, S., Hori, C., Taguchi, S.: “Microbial secretion of lactate-enriched oligomers for efficient conversion into lactide: A biological shortcut to polylactide”, J Biosci Bioeng., in press.

14

Hori, C., Suzuki, H., Igarashi, K., Samejima, M.: “Transcriptional response of cellobiose dehydrogenase gene to cello- and xylooligosaccharides in the basidiomycete Phanerochaete chrysosporium.” Applied Environmental Microbiology Vol.78(10), pp.3770-3773, 2012.

13

Yoshimi, Y., Sugawara, Y., Hori, C., Igarashi, K., Kaneko, S., Tsumuraya, Y., Kotake, T.: “A protease/peptidase from culture medium of Flammulina velutipes that acts on arabinogalactan-protein.”, Bioscience, Biotechnology, and Biochemistry, Nov 25, pp.1-7, 2016.

12

Song, X., Yu, X., Hori, C., Demura, T., Ohtani, M., Zhuge, Q. Heterologous overexpression of poplar SnRK2 genes enhanced salt stress tolerance in Arabidopsis thaliana. Frontiers in Plant Science Vol.7(612), pp.1-11, 2016.

11

Song, X., Ohtani, M, Hori, C., Takebayashi, A., Hiroyama, R., Rejab, N.A., Suzuki, T., Demura, T., Yin, T., Yu, X., Zhuge, Q.: “Physical interaction between SnRK2 and PP2C is conserved in Populus trichocarpa.” Plant Biotechnology, Vol.32, pp.337-341, 2015. 

10

Hori, C., Ishida, T., Igarashi, K., Samejima, M., Suzuki, H., Master, E., Ferreira, P., Ruiz-Dueñas, F.J., Held, B., Canessa, P., Larrondo, L.F., Schmoll, M., Druzhinina, I.S., Kubicek, C.P., Gaskell, J.A., Kersten, P., St John, F., Glasner, J., Sabat, G., Splinter, BonDurant S., Syed, K., Yadav, J., Mgbeahuruike, A.C., Kovalchuk, A., Asiegbu, F.O., Lackner, G., Hoffmeister, D., Rencoret, J., Gutiérrez, A., Sun, H., Lindquist, E., Barry, K., Riley, R., Grigoriev, I.V., Henrissat, B., Kües, U., Berka, R.M., Martínez, A.T., Covert, S.F., Blanchette, R.A., Cullen, D.: “Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome gives insight into its pioneer colonization strategies of wood.” PLOS genetics, Vol.10(12), pp.e1004759, 2014.

9

Hori, C., Gaskel, J., Igarashi, K., Kersten P., Mozuch M., Samejima M., Cullen D.: “Temporal alterations in the secretome of the selective ligninolytic fungus Ceriporiopsis subvermispora during growth on aspen wood reveal this organism’s strategy for degrading lignocellulose.” Applied Environmental Microbiology Vol.80(7), pp.2062-2070, 2014.

8

Hori, C., Gaskel, J., Igarashi, K., Samejima, M., Hibbett, D., Henrissat, B., Cullen, D.: “Genome-wide analysis of polysaccharides degrading enzymes in eleven white- and brown-rot Polyporales provides insight into mechanisms of wood decay.” Mycologia Vol.105(6), pp.1412-1427, 2013.

7

Floudas, D., Binder, M., Riley, R., Barry, K., Blanchette, R.A., Henrissat, B., Martínez, A.T., Otillar, R., Spatafora, J.W., Yadav, J.S., Aerts, A., Benoit, I., Boyd, A., Carlson, A., Copeland, A., Coutinho, P.M,, de Vries, R.P., Ferreira, P., Findley, K., Foster, B., Gaskell, J., Glotzer, D., Górecki, P., Heitman, J., Hesse, C., Hori, C., Igarashi, K., Jurgens, JA., Kallen, N., Kersten, P., Kohler, A., Kües, U., Kumar, T.K., Kuo, A., LaButti, K., Larrondo, L.F., Lindquist, E., Ling, A., Lombard, V., Lucas, S., Lundell, T., Martin, R., McLaughlin, D.J., Morgenstern, I., Morin, E., Murat, C., Nagy, L.G., Nolan, M., Ohm, R.A., Patyshakuliyeva, A., Rokas, A., Ruiz-Dueñas, F.J., Sabat, G., Salamov, A., Samejima, M., Schmutz, J., Slot, J.C., St John, F., Stenlid, J., Sun, H., Sun, S., Syed, K., Tsang, A., Wiebenga, A., Young, D., Pisabarro, A., Eastwood, D.C., Martin, F., Cullen, D., Grigoriev, I.V., Hibbett, D.S.: “The Paleozoic origin of enzymatic mechanisms for decay of lignin reconstructed using 31 fungal genomes.” Science Vol.236(6089), pp.1715-1719, 2012.

6

Higashijima, K., Hori, C., Igarashi, K., Enomae, T., Isogai, A. : First aid for flood-damaged paper using saltwater: The inhibiting effect of saltwater on mold growth. Studies in conservation, Vol.57(3), pp.164-171, 2012.

5

Suzuki, H., MacDonald, J., Syed, K., Salamov, A., Hori, C., Aerts, A., Henrissat, B., Wiebenga, A., VanKuyk, P.A., Barry, K., Lindquist, E., LaButti, K., Lapidus, A., Lucas, S., Coutinho, P., Gong, Y., Samejima, M., Mahadevan, R., Abou-Zaid, M., de Vries, R.P., Igarashi, K., Yadav, J.S., Grigoriev, I.V., Master, E.R. : Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC Genomics, Vol.13, pp.444-460, 2012

4

Fernandez-Fueyo, E., Ruiz-Dueñas, F.J., Ferreira, P., Floudas, D., Hibbett, D.S., Canessa, P., Larrondo, L.F., James, T.Y., Seelenfreund, D., Lobos, S., Polanco, R., Tello, M., Honda, Y., Watanabe, T., Watanabe, T., San, R.J., Kubicek, C.P., Schmoll, M., Gaskell, J., Hammel, K.E., St John, F.J., Vanden Wymelenberg, A., Sabat, G., Splinter Bondurant, S., Syed, K., Yadav, J.S., Doddapaneni, H., Subramanian, V., Lavín, J.L., Oguiza, J.A., Perez, G., Pisabarro, A.G., Ramirez, L., Santoyo, F., Master, E., Coutinho, P.M., Henrissat, B., Lombard, V., Magnuson, J.K., Kües, U., Hori, C., Igarashi, K., Samejima, M., Held, B.W., Barry, K.W., Labutti, K.M., Lapidus, A., Lindquist, E.A., Lucas, S.M., Riley, R., Salamov, A.A., Hoffmeister, D., Schwenk, D., Hadar, Y., Yarden, O., de Vries, R.P., Wiebenga, A., Stenlid, J., Eastwood, D., Grigoriev, I.V., Berka, R.M., Blanchette, R.A., Kersten, P., Martinez, A.T., Vicuna, R., Cullen, D. : Comparative genomics of Ceriporiopisis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proceedings of National Academy of Science the United States of America, Vol.109(14), pp.5458-5463, 2012

3

Hori, C., Igarashi, K., Katayama, A., Samejima, M. : Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose. FEMS Microbiology Letter, Vol.321(1), pp.14-23, 2011 

2

石黒真希、堀 千明、片山 映、五十嵐圭日子、高畠幸司、金子 哲、鮫島正浩:エノキタケのトランスクリプトーム配列情報を用いた全分泌タンパク質の解析. 木材学会誌, Vol.56, pp.388-396, 2010.

1

Igarashi, K., Ishida, T., Hori, C., Samejima, M. : Characterization of endoglucanase belonging to new subfamily of glycoside hydrolase family 45 from the basidiomycete Phanerochaete chrysosporium. Appllied Environmental Microbiology, Vol.74(18), pp.5628-34, 2008.

その他のメンバー

148

Kenji TAKISAWA, Toshihiko OOI, Ken’ichiro MATSUMOTO, Ryosuke KADOYA, Seiichi TAGUCHI: “Xylose-based hydrolysate from eucalyptus extract as feedstock for poly(lactate-co-3-hydroxybutyrate) production in engineered Escherichia coli“, Process Biochem., Vol. 54, pp. 102-105, 03.05 Link

147

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:“Genome-wide screening of transcription factor deletion targets in Escherichia coli for enhanced production of lactate-based polyesters”, J. Biosci. Bioeng., Vol. 123, pp.535-539, 2017.5.  PubMed

141

Jian SUN, Camila UTSUNOMIA, Shohei SASAKI, Ken’ichiro MATSUMOTO, Toshihiko YAMADA, Toshihiko OOI, Seiichi TAGUCHI:“Microbial production of poly(lactate-co-3-hydroxybutyrate) from hybrid Miscanthus-derived sugars”, Biosci. Biotechnol. Biochem., Vol. 80, pp. 818-820, 2016.04.  PumMed

140

Jian SUN, Ken’ichiro MATSUMOTO, Yuta TABATA, Ryosuke KADOYA, Toshihiko OOI, Hideki ABE, Seiichi TAGUCHI: “Molecular weight-dependent degradation of D-lactate-containing polyesters by polyhydroxyalkanoate depolymerases from Variovorax sp. C34 and Alcaligenes faecalis T1″, Appl. Microbiol. Biotechnol., Vol. 99, pp. 9555-9563, 2015.11.  PumMed

139

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Indirect positive effects of a sigma factor RpoN deletion on the lactate-based polymer production in Escherichia coli”, Bioengineered, Vol. 6, pp. 307-311, 2015.09. PubMed

138

Ryosuke KADOYA, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “MtgA Deletion-Triggered Cell Enlargement of Escherichia coli for Enhanced Intracellular Polyester Accumulation”, PLos ONE, Vol.10, e0125163, 2015.6. PubMed

134

Ken’ichiro MATSUMOTO, Kota TOBITANI, Shunsuke AOKI, Yuyang SONG, Toshihiko OOI, Seiichi TAGUCHI: ” Improved production of poly(lactic acid)-like polyester based on metabolite analysis to address the rate-limiting step”, AMB Express, Vol.4, 83, 2014.11. Pubmed

75

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI:”Enhanced production of poly(lactate-co-3-hydroxybutyrate) from xylose in engineered Escherichia coli overexpressing a galactitol transporter”, Appl. Microbiol. Biotechnol., Vol.98. pp.2453-60, 2014.05. Pubmed

74

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, in press, 2013. Link

73

Ryota Yamagami, Koki Yamashita, Hiroshi Nishimasu, Chie Tomikawa,Anna OCHI,Chikako Iwashita, Akira Hirata, Ryuichiro Ishitani, Osamu Nureki, Hiroyuki Hori: “The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO)”, the journal of biological chemistry, 2013, in press Pubmed

72

Ken’ichiro MATSUMOTO, Yoshikazu TANAKA, Tsuyoshi WATANABE, Ren MOTOHASI, Koji IKEDA, Kota TOBITANI, Min YAO, Isao TANAKA, Seiichi TAGUCHI: “Directed evolution and structural analysis of NADPH-dependent acetoacetyl-CoA reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics”, Appl. Environ. Microbiol., Vol.79. pp.6134-6139 2013.10.Pubmed

71

Anna OCHI, Ken’ichiro MATSUMOTO, Takashi OOBA, Kohei SAKAI , Takeharu TSUGE, and Seiichi TAGUCHI: “Engineering of class I lactate-polymerizing polyhydroxyalkanoate synthases from Ralstonia eutropha that synthesize lactate-based polyester with a block nature”, Appl. Microbiol. Biotechnol., Vol.97, pp. 3441-3447, 2013.04. Pubmed

70

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Link

69

Ken’ichiro MATSUMOTO, Satsuki TERAI, Ayako ISHIYAMA, Jian SUN, Taizo KABE, Yuyang SONG, John NDUKO, Tadahisa IWATA, Seiichi TAGUCHI: “One-pot microbial production, mechanical properties and enzymatic degradation of isotactic P[(R)-2-hydroxybutyrate] and its copolymer with (R)-lactate”, Biomacromolecules, Vol.14, pp.1913-1918, 2013.04. Link

68

John Masani NDUKO, Ken’ichiro MATSUMOTO, Toshihiko OOI and Seiichi TAGUCHI: “Effectiveness of xylose utilization for high yield production of lactate-enriched P(lactate-co-3-hydroxybutyrate) using a lactate-overproducing strain of Escherichia coli and an evolved lactate-polymerizing enzyme”,
Metab. Eng., Vol.15, pp.159-166, 2013.01. Pubmed

67

Yuyang SONG, Ken’ichiro MATSUMOTO, Tsutomu TANAKA, Akihiko Kondo, and Seiichi TAGUCHI: “Single-step production of polyhydroxybutyrate from starch by using α-amylase cell-surface displaying system of Corynebacterium glutamicum”, J. Biosci. Bioeng.,Vol.115(1),pp.12-14,2012.09 Pubmed

66

John Masani NDUKO, Wakako SUZUKI, Ken’ichiro MATSUMOTO, Hirokazu KOBAYASHI, Toshihiko OOI, Atsushi FUKUOKA and Seiichi TAGUCHI: “Polyhydroxyalkanoates production from cellulose hydrolysate in Escherichia coli LS5218 with superior resistance against 5-hydroxymethylfurfural“, J. Biosci. Bioeng., Vol.113(1), pp.70-72 2012.01. Pubmed

65

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., 2011, in press. Pubmed

64

Takako AWAI, Anna OCHI, IHSANAWATI, Toru SENGOKU, Akira HIRATA, Yoshitaka BESSHO, Shigeyuki YOKOHAMA, Hiroyuki HORI: “Substrate tRNA Recognition Mechanism of a Multisite-specific tRNA Methyltransferase, Aquifex aeolicus Trm1, Based on the X-ray Crystal Structure”, J. Biol. Chem., Vol. 286(40), pp. 35236-35246, 2011.10.

63

Yuyang SONG, Ken’ichiro MATSUMOTO, Miwa YAMADA, Aoi GOHDA, Christopher J. BRIGHAM, Anthony J. SINSKEY, Seiichi TAGUCHI: “Engineered Corynebacterium glutamicum as an endotoxin-free platform strain for lactate-based polyester production”, Appl. Microbiol. Biotechnol., 2011, in press. Pubmed

62

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press. Link

61

Jian SUN, Ken’ichiro MATSUMOTO, John Masani NDUKO, Toshihiko OOI, Seiichi TAGUCHI: “Enzymatic characterization of a depolymerase from the isolated bacterium Variovorax sp. C34 that degrades poly(enriched lactate-co-3-hydroxybutyrate)”, Polymer Degradation and Stability, in press.

60

Ryosuke KADOYA, Yu KODAMA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Enhanced cellular content and lactate fraction of the P(lactate-co-3-hydroxybutyrate) produced in recombinant Escherichia coli by the deletion of sigma factor RpoN”., J. Biosci. Bioeng., in press.

59

Miwa YAMADA, Ken’ichiro MATSUMOTO, Shu URAMOTO, Ren MOTOHASHI, Hideki ABE, Seiichi TAGUCHI: “Lactate fraction dependent machanical properties of semitransparent poly(lactate-co-3-hydroxybutyrate)s produced by control of lactyl-CoA monomer fluxes in recombinant Escherichia coli“, J. Biotechnol., Vol. 154, pp. 255-260, 2011.07. Pubmed

58

Kesaven BUHBALAN, Jo-Ann CHUAH, Fumi SHOZUI, Seiichi TAGUCHI, Christopher J. BRIGHAM, Anthony J. SINSKEY, and K. Kumar SUDESH: “Characterization of the highly active PHA synthase of Chromobacterium sp. USM2″, Appl. Environ. Microbiol. Vol. 77(9), pp. 2926-2933, 2011.05. Pubmed

57

Ken’ichiro MATSUMOTO, Kei KITAGAWA, Sung-Jin JO, Yuyang SONG, Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2011.04. Pubmed

56

Kazuo ISHIDA, Takashi KUNIBAYASHI, Chie TOMIKAWA, Anna OCHI, Tamotsu KANAI, Akira HIRATA, Chikako IWASHITA, Hiroyuki HORI: “Pseudouridine at position 55 in tRNA controls the contents of other modified nucleotides for low-temperature adaptation in the extreme-thermophilic eubacterium Thermus thermophilus”, Nucl. Acids Res., Vol. 39(6), pp. 2304-2318, 2011.3.

55

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Jian SUN, Seiichi TAGUCHI: “Biosynthesis of lactate(LA)-based polyester with a 96 mol% LA fraction and its application to stereocomplex formation”, Polymer Degradation and Stability, Vol. 96(4) pp. 499-504. 2011.02. Journal

54

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. Pubmed

53

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem.,Vol. 75(2), pp. 364-366, 2011.02. Pubmed

52

Ken’ichiro MATSUMOTO, Miwa YAMADA, Chean Ring LEONG, Sung-Jin JO, Tomohisa KUZUYAMA, Seiichi TAGUCHI: “A new pathway for poly(3-hydroxybutyrate) production in Escherichia coli and Corynebacterium glutamicum by functional expression of a new acetoacetyl-coenzyme A synthase”, Biosci. Biotechnol. Biochem., Biosci. Biotechnol. Biochem., Vol. 75(2), pp. 364-366, 2011.02. < Pubmed

51

Yoshitake ORIKASA, Yoshinobu NODASAKA, Takuji OHYAMA, Hidetoshi OKUYAMA, Nobutoshi ICHISE, Isao YUMOTO, Naoki MORITA, Min WEI, Takuji OHWADA: “Enhancement of the nitrogen fixation efficiency of genetically-engineered Rhizobium with high catalase activity”.
J Biosci Bioeng., Vol. 110(4), pp. 397-402, 2010.10 PubMed

50

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

49

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

48

Ken’ichiro MATSUMOTO, Yuichi MUKAI, Daiki OGATA, Fumi SHOZUI, John Masani NDUKO, Seiichi TAGUCHI, Toshihiko OOI. :”Characterization of thermostable FMN-dependent NADH azoreductase from the moderate thermophile Geobacillus stearothermophilus” ,Appl. Microbiol. Biotechnol., Vol86(5), pp.1431-1438, 2010, 04. PubMed

47

Jian SUN, Fumi SHOZUI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI: “Production of P(3-hydroxybutyrate-co-3-hydroxyhexanoate-co-3-hydroxyoctanoate) terpolymers using a chimeric PHA synthase in recombinant Ralstonia eutropha and Pseudomonas putida“, Biosci. Biotechnol. Biochem., Vol. 74(8) pp.1716-1718, 2010.08. Pubmed

46

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

45

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI. : ”Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″ , Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

44

Ken’ichiro MATSUMOTOKei KITAGAWA, Sung-Jin JO, Yuyang SONG, , Seiichi TAGUCHI: “Production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Corynebacterium glutamicum using propionate as a precursor”, J. Biotechnol., Vol. 152(4), pp. 144-146, 2010.08. Pubmed

43

Qin WANG, Alexander MUEllER, Ring Leong CHEAN, Ken’ichiro MATSUMOTO, Seiichi TAGUCHI, Christopher T. NOMURA: “Quick and efficient method for genetic transformation of biopolymer producing bacteria”, J. Chem. Technol. Biotechnol., Vol. 85(6), pp. 775-778, 2010.06. Journal

42

Shinji SUGIHARA, Yoshitake ORIKASA, Hidetoshi OKUYAMA:
“The Escherichia coli highly expressed entD gene complements the pfaE deficiency in a pfa gene clone responsible for the biosynthesis of long-chain n-3 polyunsaturated fatty acids”.
FEMS Microbiol Lett., Vol. 307(2), pp. 207-211, 2010.06 PubMed

41

Ken’ichiro MATSUMOTO, Yoshitake ORIKASA, Kenta ICHINOHE, Shigeki HASHIMOTO, Toshihiko OOI, Seiichi TAGUCHI : “Flow cytometric analysis of the contributing factors for antimicrobial activity enhancement of cell-penetrating type peptides: case study on engineered apidaecins” , Biochem. Biophys. Res. Commun., Vol. 395(1), pp. 7-10, 2010.04 PubMed

40

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. : “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

39

Miwa YAMADA, Ken’ichiro MATSUMOTO, Kotaro SHIMIZU, Shu URAMOTO, Takanori NAKAI, Fumi SHOZUI, Seiichi TAGUCHI. :  “Adjustable mutations in lactate (LA)-polymerizing enzyme for the microbial production of LA-based polyesters with tailor-made monomer composition” , Biomacromolecules, Vol. 11(3), pp. 815-819, 2010.03. PubMed

38

Anna Ochi, Koki MAKABE, Kunihiro KUWAJIMA, Hiroyuki HORI: “Flexible recognition of the tRNA G18 methylation target site by TrmH methyltransferase through first binding and induced fit processes” J. Biol. Chem., Vol. 285(12), pp. 9018-9029 2010.03.

37

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol. Vol. 85(4), pp.949-954 , 2010.01 PubMed

36

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takanori NAKAI, Miwa YAMADA, Seiichi TAGUCHI: “Biosynthesis of novel terpolymers Poly(lactate-co-3-hydroxybutyrate-co-3-hydroxyvalerate) in lactate-overproducing mutant Escherichia coli JW0885 by feeding propionate as a precursor of 3-hydroxyvalerate”, Appl. Microbiol. Biotechnol. Vol. 85(4), pp.949-954 , 2010.01 PubMed

35

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Takahiro SASAKI, Seiichi TAGUCHI: “Engineering of polyhydroxyalkanoate synthase by Ser477X/Gln481X saturation mutagenesis for efficient production of 3-hydroxybutyrate-based copolyesters”, Appl. Microbial. Biotechnol., Vol. 84(6), pp.1117-1124, 2009.10. PubMed

34

Sung-Jin Jo, Chean Ring Leong, Ken’ichiro Matsumoto, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration.”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

33

Yoshitake ORIKASA, Kenta ICHINOHE, Junki SAITO, Shigeki HASHIMOTO, Ken’ichiro MATSUMOTO, Toshihiko OOI, Seiichi TAGUCHI: “Hydrophobicity in chemically modified side-chain of cysteine residues of thanatin is related to antimicrobial activity against Micrococcus luteus“. Biosci. Biotechnol. Biochem., Vol. 73(7), pp.1683-1684, 2009.07.PubMed

32

Takako AWAI, Satoshi KIMURA, Chie TOMIKAWA, Anna OCHI, IHSANAWATI,Yoshitaka BESSHO, Shigeyuki YOKOYAMA, Satoshi OHNO, Kazuya NISHIKAWA, Takashi YOKOBAWA, Tsutomu SUZUKI, Hiroyuki HORI: “Aquifex aeolicus tRNA (N2,N2-guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA”, J. Biol. Chem., 384(31), pp. 20467-20478. 2009.7.

31

Yoshitake Orikasa, Mika Tanaka, Shinji Sugihara, Ryuji Hori, Takanori Nishida, Akio Ueno, Naoki Morita, Yutaka Yano, Kouhei Yamamoto, Akira Shibahara, Hidenori Hayashi, Yohko Yamada, Akiko Yamada, Reiko Yu, Kazuo Watanabe, Hidetoshi Okuyama: “pfaB products determine the molecular species produced in bacterial polyunsaturated fatty acid biosynthesis”. FEMS Microbiol Lett., Vol. 295(2), pp. 170-176, 2009

30

Sung-Jin Jo, Chean Ring Leong, Ken’ichiro Matsumoto, Seiichi TAGUCHI: “Dual production of poly(3-hydroxybutyrate) with glutamate using Corynebacterium glutamicum by regulation of biotin concentration.”, J. Biosci. Bioeng., Vol.107(4), pp.409-411, 2009.04.PubMed

29

Miwa YAMADA, Ken’ichiro MATSUMOTO, Takanori NAKAI, Seiichi TAGUCHI: “Microbial production of lactate-enriched poly[(R)-lactate-co-(R)-3-hydroxybutyrate] with novel thermal properties”, Biomacromolecules, Vol.10(4), pp.677-681, 2009.04.PubMed

28

Ken’ichiro Matsumoto, Fumi SHOZUI, Yasuharu SATOH, Kenji TAJIMA, Masanobu MUNEKATA, and Seiichi TAGUCHI: “Kinetic analysis of engineered polyhydroxyalkanoates synthases with broad substrate specificity”, Polymer Journal., Vol. 41(3), pp.237-240, 2009.03Journal.

27

Seiichi TAGUCHI, Miwa YAMADA, Ken’ichiro MATSUMOTO, Kenji TAJIMA, Yasuharu SATO, Masanobu MUNEKATA, Katsuhiro OHONO, Katsunori KOHDA, Takashi SHIMAMURA, Hiromi KAMBE, and Shusei OBATA: “A microbial factory for lactate-based polyesters using a lactate-polymerizing enzyme”, Proc. Natl. Acad. Sci. USA, Vol. 105 (45), pp. 17323-17327. 2008.11 PubMed

26

Shinji Sugihara, Yoshitake Orikasa, Hidetoshi Okuyama: “An EntD-like phosphopantetheinyl transferase gene from Photobacterium profundum SS9 complements pfa genes of Moritella marina strain MP-1 involved in biosynthesis of docosahexaenoic acid”. Biotechnol Lett. 30(3):411-414. 2008.

25

Hidetoshi Okuyama, Yoshitake Orikasa, Takanori Nisida : “Significance of antioxidative functions of eicosapentaenoic and docosahexaenoic acids in marine microorganisms”. Appl Environ Microbiol. 74(3):570-574. 2008.

24

Tsuyoshi WATANABE, Yuji ODA: “Comparison of Sucrose-Hydrolyzing Enzymes Produced by Rhizopus oryzae and Amylomyces rouxii“, Biosci. Biotechnol. Biochem., Vol. 72 pp.3167-3173, 2008.12.

23

Chie TOMIKAWA, Anna OCHI, Hiroyuki HORI: “The C-terminal region of thermophilic tRNA (m7G46) methyltransferase (TrmB) stabilizes the dimer structure and enhances fidelity of methylation”, Proteins, 71(3), pp. 1400-1408, 2008.5.

22

Keisuke MATSUMOTO, Chie TOMIKAWA, Takashi TOYOOKA, Anna OCHI, Yoshitaka TAKANO, Naoyuki TAKAYANAGI, Masato ABE, Yaeta ENDO, Hiroyuki HORI: “Production of yeast tRNA (m(7)G46) methyltransferase (Trm8-Trm82 complex) in a wheat germ cell-free translation system”, J. Biotechnol., Vol. 133(4), pp. 453-460, 2008.2.

21

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

20

Takanori Nishida, Naoki Morita, Yutaka Yano, Yoshitake Orikasa and Hidetoshi Okuyama : “The antioxidative function of eicosapentaenoic acid in a marine bacterium, Shewanella marinintestina IK-1″. FEBS Lett. 581(22): 4212-4216. 2007.

19

Yoshitake Orikasa, Yukiya Ito, Takanori Nishida, Kazuo Watanabe, Naoki Morita, Takuji Ohwada, Isao Yumoto, and Hidetoshi Okuyama: “Enhanced heterologous production of eicosapentaenoic acid in Escherichia coli cells that coexpress eicosapentaenoic acid biosynthesis pfa genes and foreign DNA fragments including a high-performance catalase gene, vktA“. Biotechnol. Lett., 29(5): 803-809. 2007.

18

Hidetoshi Okuyama, Yoshitake Orikasa and Takanori Nishida: “In vivo conversion of triacylglycerol to docosahexaenoic acid-containing phospholipids in a thraustochytrid-like microorganism, strain 12B”. Biotechnol Lett. Dec;29(12):1977-81, 2007.

17

Hidetoshi Okuyama, Yoshitake Orikasa, Takanori Nishida, Kazuo Watanabe, and Naoki Morita : “Bacterial genes responsible for the biosynthesis of eicosapentaenoic and docosahexaenoic acids and their heterologous expression”. Appl Environ Microbiol., 73(3): 665-670 (Review). 2007.

16

Sung-Jin JO, Ken’ichiro MATSUMOTO, Chean Ring LEONG, Toshihiko OOI, Seiichi TAGUCHI : “Improvement of poly(3-hydroxybutyrate) [P(3HB)] production in Corynebacterium glutamicum by codon optimization, point mutation and gene dosage of P(3HB) biosynthetic genes”, J. Biosci. Bioeng., Vol. 104(6), pp. 457-463, 2007.12PubMed

15

Anna OCHI, Hiroyuki HORI: ”Hydroxyl radical probing of tRNA (Gm18) methyltransferase [TrmH]-AdoMet-artificial tRNA ternary complex”, Nucleic Acids Symp. Ser., Vol. 51(1), pp.373-374, 2007.

14

Yuki MUNEYOSHI, Keisuke MATSUMOTO, Chie TOMIKAWA, Takashi TOYOOKA, Anna OCHI, Takashi MASAOKA, Yaeta ENDO, Hiroyuki HORI: ” Hetero subunit interaction and RNA recognition of yeast tRNA (m7G46) methyltransferase synthesized in a wheat germ cell-free translation system”, Nucleic Acids Symp. Ser., Vol. 51(1), pp. 359-360, 2007.

13

Miwa YAMADA, Akiko WAKUDA, Seiichi TAGUCHI : “Morphological Change in Cellular Granule Formation of Poly[(R)-3-hydroxybutyrate] Caused by DNA-Binding-Related Mutations of an Autoregulated Repressor PhaR”, Biosci. Biotechnol. Biochem., Vol. 71(6), 1572-1576, 2007.06 PubMed

12

Miwa YAMADA, Koichi YAMASHITA, Akiko WAKUDA, Kazuyoshi ICHIMURA, Akira MAEHARA, Michihisa MAEDA, and Seiichi TAGUCHI: “Autoregulator protein PhaR for biosynthesis of polyhydroxybutyrate [P(3HB)]  possibly has two separate domains that bind to the target DNA and P(3HB): functional mapping of amino acid residues responsible for DNA binding.”, J. Bacteriol., Vol. 189(3), pp. 1118-1127, 2007.02PubMed

11

Fumi SHOZUI, Ken’ichiro MATSUMOTO, Ren MOTOHASHI, Miwa YAMADA, Seiichi TAGUCHI. :”Establishment of a metabolic pathway to introduce the 3-hydroxyhexanoate unit into LA-based polyesters via a reverse reaction of β-oxidation in Escherichia coli LS5218″ , Polymer Degradation and Stability, Vol. 95(8), pp. 1340-1344, 2010.08. Journal

10

Takanori Nishida, Yoshitake Orikasa, Kazuo Watanabe, and Hidetoshi Okuyama: “The cell membrane-shielding function of eicosapentaenoic acid for Escherichia coli against exogenously added hydrogen peroxide”. FEBS Lett., 580: 6690-6694. 2006.

9

Yoshitake Orikasa, Takanori Nishida, Akiko Yamada, Reiko Yu, Kazuo Watanabe, Akira Hase, Naoki Morita, and Hidetoshi Okuyama: “Recombinant production of docosahexaenoic acid in a mode of polyketide biosynthesis in Escherichia coli“. Biotechnol. Lett., 28: 1841-1847. 2006.

8

Yoshitake Orikasa, Takanori Nishida , Akira Hase, Kazuo Watanabe, Naoki Morita, and Hidetoshi Okuyama: “A phosphopantetheinyl transferase gene responsible for biosynthesis of n-3 polyunsaturated fatty acids from Moritella marina strain MP-1″. FEBS Lett., 580: 4423-4429. 2006.

7

Takanori Nishida, Yoshitake Orikasa, Yukiya Ito, Reiko Yu, Akiko Yamada, Kazuo Watanabe, and Hidetoshi Okuyama: “Escherichia coli engineered to produce eicosapentaenoic acid becomes resistant against oxidative damages”. FEBS Lett., 580: 2731-2735. 2006.

6

Fumi SHOZUI, Jian SUN, Yuyang SONG, Miwa YAMADA, Kohei SAKAI, Ken’ichiro MATSUMOTO, Kazuma TAKASE, Seiichi TAGUCHI: “A New Beneficial Mutation in Pseudomonas sp. 61-3 Polyhydroxyalkanoate (PHA) Synthase for Enhanced Cellular Content of 3-Hydroxybutyrate-Based PHA Explored Using Its Enzyme Homolog as a Mutation Template”, Biosci. Biotechnol. Biochem., Vol. 74(8), pp.1710-1712, 2010.08. Pubmed

5

Keisuke MATSHUMOTO, Takashi TOYOOKA, Chie TOMIKAWA, Anna OCHI, Yoshitaka TAKANO, Naoyuki TAKAYANAGI, Yaeta ENDO, Hiroyuki HORI: “RNA recognition mechanism of eukaryote tRNA (m7G46) methyltransferase (Trm8?Trm82 complex)”, FEBS Lett., Vol. 581(8), pp. 1599-1604, 2007.4

4

Sung-Jin JO, Michihisa MAEDA, Toshihiko OOI,  Seiichi TAGUCHI: “Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum.” J. Biosci. Bioeng., Vol. 102, pp. 233-236, 2006.09PubMed

3

Koichi YAMASHITA, Miwa YAMADA, Keiji NUMATA, Seiichi TAGUCHI: “Nonspecific hydrophobic interactions of a repressor protein, PhaR, with poly[(R)-3-hydroxybutyrate] film studied with a quartz crystal microbalance”, Biomacromolecules, Vol. 7(8), pp. 2449-2454, 2006.08PubMed

2

K. Hirota, Y. Nodasaka, Y. Orikasa, H. Okuyama, and I. Yumoto : “Shewanella pneumatophoruse sp. nov., eicosapentanoic-acid-producing marine bacterium isolated from pacific mackerel (Pneumatophorus japonicus) intestine”. Int. J. Syst. Evol. Microbiol., 55: 2355-2359. 2005.

1

Yoshitake Orikasa, Akiko Yamada, Reiko Yu, Yukiya Ito, Takanori Nishida, Isao Yumoto, Kazuo Watanabe, and Hidetoshi Okuyama: “Characterization of the eicosapentaenoic acid biosynthesis gene cluster from Shewanella sp. strain SCRC-2738″. Cell. Mol. Biol., Vol.50, 625-630, 2004.

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